FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG5692-RA through 18771 annotations produced 1 hits

Partner of Inscuteable (raps):

Annotation Number : CG5692
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0040080
Gbrowse : chr3R:23408526-23412099 (+) // 100.0 //
Probeset : 1639984_at
Accessions : protein= NP_524999;, nucleotide= NM_080260;
Pathway : 0005938 // cell cortex // traceable author statement /// 0045177 // apical part of cell // non-traceable author statemen
Interpro : 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005488 // binding // inferred from elec
FlyMine data for FBgn0040080.
BDGP gene expression has embryonic in situ data for raps: 4 pix of staining in 1 body parts.
BioGrid reports that CG5692 interacts with CG6570 CG9927 CG5884 CG6684 CG6803 CG6905 CG7323 CG7386 CG8264 CG8292 CG8697 CG8948 CG5055 CG5055 CG10060 CG11312 CG10261 .
TRiP has 3 RNAi stocks for FBgn0040080 available for purchase.
VDRC has 1 RNAi stocks for FBgn0040080 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	172 ± 12	4 of 4	1.40	Up
Head	93 ± 5	4 of 4	0.80	Down
Eye	99 ± 5	4 of 4	0.82	None
Thoracicoabdominal ganglion	129 ± 2	4 of 4	1.10	None
Salivary gland	174 ± 14	4 of 4	1.43	Up
Crop	152 ± 4	4 of 4	1.20	Up
Midgut	129 ± 5	4 of 4	1.10	None
Tubule	64 ± 6	4 of 4	0.50	Down
Hindgut	134 ± 3	4 of 4	1.10	None
Heart	115 ± 9	4 of 4	0.95	None
Fat body	95 ± 7	4 of 4	0.78	Down
Ovary	238 ± 6	4 of 4	2.00	Up
Testis	35 ± 1	4 of 4	0.30	Down
Male accessory glands	92 ± 4	4 of 4	0.80	Down
Virgin spermatheca	177 ± 11	4 of 4	1.45	Up
Mated spermatheca	188 ± 7	4 of 4	1.54	Up
Adult carcass	56 ± 3	4 of 4	0.50	Down
Larval CNS	468 ± 46	4 of 4	3.84	Up
Larval Salivary gland	169 ± 11	4 of 4	1.39	Up
Larval midgut	224 ± 8	4 of 4	1.84	Up
Larval tubule	63 ± 8	4 of 4	0.50	Down
Larval hindgut	323 ± 4	4 of 4	2.65	Up
Larval fat body	101 ± 9	4 of 4	0.80	None
Larval trachea	192 ± 12	4 of 4	1.58	Up
Larval carcass	121 ± 6	4 of 4	1.00	None
S2 cells (growing)	291 ± 14	4 of 4	2.39	Up
Whole fly	121 ± 7	4 of 4

Looking for CG5692-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720