Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG5695-RA through 18771 annotations produced 1 hits



jaguar (jar):

Annotation Number : CG5695
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0011225
Gbrowse : chr3R:20078573-20096953 (-) // 100.0 //
Probeset : 1623185_s_at
Accessions : protein= NP_001014647; /// NP_001014648; /// NP_001014649; /// NP_001014650; /// NP_524478; /// NP_732976;, nucleotide= NM_001014647; /// NM_001014648; /// NM_001014649; /// NM_001014650; /// NM_079754; /// NM_170138;
Pathway : nurse cell to oocyte // inferred from direct assay /// 0019749 // cytoskeleton-dependent cytoplasmic transport
Interpro : nurse cell to oocyte // inferred from mutant phenotype /// 0030036 // actin cytoskeleton organization // inferred from
FlyMine data for FBgn0011225.
Homophila reports that CG5695 is a close match (5e-90) to human gene DFNB30;MYO3A (NP_059129), a gene associated with Deafness, autosomal recessive 30, 607101 (3).
BioGrid reports that CG5695 interacts with CG3722 CG4354 CG5020 .
TRiP has 1 RNAi stocks for FBgn0011225 available for purchase.
VDRC has 3 RNAi stocks for FBgn0011225 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain374 124 of 4 1.70Up
Head300 174 of 4 1.40Up
Eye445 104 of 4 2.08Up
Thoracicoabdominal ganglion375 104 of 4 1.80Up
Salivary gland297 124 of 4 1.39Up
Crop164 204 of 4 0.80None
Midgut351 104 of 4 1.60Up
Tubule1262 634 of 4 5.90Up
Hindgut357 144 of 4 1.70Up
Heart178 144 of 4 0.83None
Fat body496 144 of 4 2.32Up
Ovary234 94 of 4 1.10None
Testis319 64 of 4 1.50Up
Male accessory glands290 104 of 4 1.40Up
Virgin spermatheca870 414 of 4 4.07Up
Mated spermatheca693 274 of 4 3.24Up
Adult carcass215 104 of 4 1.00None
Larval CNS210 164 of 4 0.98None
Larval Salivary gland394 224 of 4 1.84Up
Larval midgut707 224 of 4 3.31Up
Larval tubule920 374 of 4 4.30Up
Larval hindgut398 234 of 4 1.86Up
Larval fat body53 54 of 4 0.20Down
Larval trachea193 194 of 4 0.90None
Larval carcass307 184 of 4 1.44Up
S2 cells (growing)79 14 of 4 0.37Down
Whole fly214 24 of 4

Looking for CG5695-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime