FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG5711-RA through 18771 annotations produced 1 hits

arrestin (Arr1):

Annotation Number : CG5711
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0000120
Gbrowse : chr2L:18078265-18080423 (+) // 100.0 //
Probeset : 1636163_at
Accessions : protein= NP_476681;, nucleotide= NM_057333;
Pathway : 0005624 // membrane fraction // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 00
Interpro : 0005515 // protein binding // inferred from physical interaction /// 0016030 // metarhodopsin binding // inferred from s
FlyMine data for FBgn0000120.
BDGP gene expression has embryonic in situ data for Arr1: 13 pix of staining in 2 body parts.
Homophila reports that CG5711 is a close match (3e-56) to human gene SAG (NP_000532), a gene associated with Oguchi disease-1, 258100 (3).
BioGrid reports that CG5711 interacts with CG6175 CG6254 CG8924 CG9015 CG5962 CG5962 .
VDRC has 2 RNAi stocks for FBgn0000120 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	706 ± 49	4 of 4	0.50	Down
Head	4801 ± 120	4 of 4	3.50	Up
Eye	9330 ± 133	4 of 4	6.90	Up
Thoracicoabdominal ganglion	9 ± 0	1 of 4	0.00	Down
Salivary gland	6 ± 3	0 of 4	0.01	Down
Crop	4 ± 1	0 of 4	0.00	Down
Midgut	9 ± 2	1 of 4	0.00	Down
Tubule	6 ± 1	1 of 4	0.00	Down
Hindgut	7 ± 1	2 of 4	0.00	Down
Heart	40 ± 23	3 of 4	0.03	Down
Fat body	7 ± 3	0 of 4	0.01	Down
Ovary	3 ± 1	0 of 4	0.00	Down
Testis	160 ± 3	4 of 4	0.10	Down
Male accessory glands	10 ± 2	3 of 4	0.00	Down
Virgin spermatheca	2 ± 0	0 of 4	0.00	Down
Mated spermatheca	6 ± 0	0 of 4	0.00	Down
Adult carcass	15 ± 3	2 of 4	0.00	Down
Larval CNS	5 ± 0	4 of 4	0.00	Down
Larval Salivary gland	8 ± 0	1 of 4	0.01	Down
Larval midgut	12 ± 2	2 of 4	0.01	Down
Larval tubule	4 ± 1	0 of 4	0.00	Down
Larval hindgut	5 ± 1	1 of 4	0.00	Down
Larval fat body	32 ± 3	2 of 4	0.00	Down
Larval trachea	888 ± 1721	3 of 4	0.66	None
Larval carcass	5 ± 0	1 of 4	0.00	Down
S2 cells (growing)	5 ± 1	1 of 4	0.00	Down
Whole fly	1352 ± 43	4 of 4

Looking for CG5711-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720