FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG5714-RA through 18771 annotations produced 1 hits

ecdysoneless (ecd):

Annotation Number : CG5714
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0000543
Gbrowse : chr3L:2263580-2265811 (-) // 100.0 //
Probeset : 1637217_at
Accessions : protein= NP_647707;, nucleotide= NM_139450;
Pathway : chitin-based cuticle // inferred from mutant phenotype /// 0008258 // head involution // inferred from mutant phenotype
Interpro : 0005737 // cytoplasm // inferred from electronic annotation
FlyMine data for FBgn0000543.
TRiP has 1 RNAi stocks for FBgn0000543 available for purchase.
VDRC has 3 RNAi stocks for FBgn0000543 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	140 ± 6	4 of 4	1.60	Up
Head	70 ± 5	4 of 4	0.80	None
Eye	70 ± 3	4 of 4	0.81	Down
Thoracicoabdominal ganglion	82 ± 4	4 of 4	0.90	None
Salivary gland	62 ± 8	4 of 4	0.72	Down
Crop	102 ± 6	4 of 4	1.20	None
Midgut	47 ± 1	4 of 4	0.50	Down
Tubule	45 ± 4	4 of 4	0.50	Down
Hindgut	58 ± 2	4 of 4	0.70	Down
Heart	66 ± 1	4 of 4	0.76	Down
Fat body	50 ± 4	4 of 4	0.58	Down
Ovary	111 ± 7	4 of 4	1.30	Up
Testis	44 ± 1	4 of 4	0.50	Down
Male accessory glands	56 ± 4	4 of 4	0.70	Down
Virgin spermatheca	40 ± 0	4 of 4	0.46	Down
Mated spermatheca	41 ± 2	4 of 4	0.48	Down
Adult carcass	84 ± 5	4 of 4	1.00	None
Larval CNS	135 ± 14	4 of 4	1.57	Up
Larval Salivary gland	57 ± 5	3 of 4	0.67	Down
Larval midgut	56 ± 4	4 of 4	0.65	Down
Larval tubule	83 ± 4	4 of 4	1.00	None
Larval hindgut	52 ± 4	4 of 4	0.60	Down
Larval fat body	88 ± 5	4 of 4	1.00	None
Larval trachea	105 ± 5	4 of 4	1.22	Up
Larval carcass	85 ± 5	4 of 4	0.99	None
S2 cells (growing)	124 ± 7	4 of 4	1.44	Up
Whole fly	86 ± 4	4 of 4

Looking for CG5714-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720