FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG5791-RA through 18771 annotations produced 1 hits

(CG5791):

Annotation Number : CG5791
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0040582
Gbrowse : chr3R:17912854-17913379 (+) // 99.01 //
Probeset : 1628639_at
Accessions : protein= NP_652235;, nucleotide= NM_143978;
FlyMine data for FBgn0040582.
BDGP gene expression has embryonic in situ data for CG5791: 8 pix of staining in 1 body parts.
BioGrid reports that CG5791 interacts with CG6864 CG9654 .
VDRC has 2 RNAi stocks for FBgn0040582 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	62 ± 4	4 of 4	0.10	Down
Head	1947 ± 137	4 of 4	3.60	Up
Eye	1228 ± 315	4 of 4	2.27	None
Thoracicoabdominal ganglion	85 ± 9	4 of 4	0.20	Down
Salivary gland	23 ± 6	2 of 4	0.04	Down
Crop	37 ± 3	4 of 4	0.10	Down
Midgut	7 ± 2	0 of 4	0.00	Down
Tubule	32 ± 8	2 of 4	0.10	Down
Hindgut	128 ± 14	4 of 4	0.20	Down
Heart	1851 ± 257	4 of 4	3.42	Up
Fat body	2955 ± 236	4 of 4	5.46	Up
Ovary	6 ± 0	0 of 4	0.00	Down
Testis	5 ± 0	0 of 4	0.00	Down
Male accessory glands	18 ± 5	0 of 4	0.00	Down
Virgin spermatheca	1582 ± 228	4 of 4	2.92	Up
Mated spermatheca	1240 ± 156	4 of 4	2.29	Up
Adult carcass	2921 ± 232	4 of 4	5.40	Up
Larval CNS	8 ± 2	1 of 4	0.02	Down
Larval Salivary gland	5 ± 2	0 of 4	0.01	Down
Larval midgut	10 ± 4	0 of 4	0.02	Down
Larval tubule	2 ± 1	0 of 4	0.00	Down
Larval hindgut	5 ± 2	0 of 4	0.01	Down
Larval fat body	4 ± 0	0 of 4	0.00	Down
Larval trachea	27 ± 38	2 of 4	0.05	Down
Larval carcass	98 ± 24	4 of 4	0.18	Down
S2 cells (growing)	8 ± 2	0 of 4	0.02	Down
Whole fly	541 ± 102	4 of 4

Looking for CG5791-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720