FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG5799-RB through 18771 annotations produced 2 hits

defective proventriculus (dve):

Annotation Number : CG5799
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0020307
Gbrowse : chr2R:18131467-18150995 (+) // 100.0 //
Probeset : 1630292_a_at
Accessions : protein= NP_477241; /// NP_477242;, nucleotide= NM_057893; /// NM_057894;
Pathway : DNA-dependent // inferred from sequence or structural similarity /// 0006355 // regulation of transcription
Interpro : DNA-dependent // inferred from electronic annotation /// 0007476 // imaginal disc-derived wing morphogenesis // inferre
FlyMine data for FBgn0020307.
BDGP gene expression has embryonic in situ data for dve: 12 pix of staining in 2 body parts.
TRiP has 1 RNAi stocks for FBgn0020307 available for purchase.
VDRC has 4 RNAi stocks for FBgn0020307 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	10 ± 1	0 of 4	1.10	None
Head	11 ± 1	2 of 4	1.20	None
Eye	3 ± 1	0 of 4	0.41	Down
Thoracicoabdominal ganglion	6 ± 2	0 of 4	0.70	None
Salivary gland	16 ± 2	0 of 4	1.79	None
Crop	10 ± 0	0 of 4	1.10	None
Midgut	14 ± 1	0 of 4	1.50	None
Tubule	7 ± 1	0 of 4	0.80	None
Hindgut	7 ± 2	0 of 4	0.70	None
Heart	10 ± 2	0 of 4	1.08	None
Fat body	16 ± 4	2 of 4	1.76	Up
Ovary	6 ± 2	0 of 4	0.70	None
Testis	1 ± 0	0 of 4	0.10	Down
Male accessory glands	36 ± 3	4 of 4	3.90	Up
Virgin spermatheca	7 ± 1	0 of 4	0.78	None
Mated spermatheca	14 ± 2	0 of 4	1.56	None
Adult carcass	20 ± 3	1 of 4	2.20	None
Larval CNS	7 ± 1	0 of 4	0.76	Down
Larval Salivary gland	10 ± 2	0 of 4	1.11	None
Larval midgut	20 ± 3	0 of 4	2.17	None
Larval tubule	6 ± 1	0 of 4	0.60	Down
Larval hindgut	9 ± 3	0 of 4	0.95	None
Larval fat body	6 ± 2	0 of 4	0.70	None
Larval trachea	8 ± 4	0 of 4	0.85	None
Larval carcass	9 ± 3	0 of 4	1.04	None
S2 cells (growing)	7 ± 1	0 of 4	0.79	None
Whole fly	9 ± 0	0 of 4

defective proventriculus (dve):

Annotation Number : CG5799
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0020307
Gbrowse : chr2R:18131467-18173923 (+) // 100.0 //
Probeset : 1631542_a_at
Accessions : protein= NP_477241; /// NP_477242;, nucleotide= NM_057893; /// NM_057894;
Pathway : DNA-dependent // inferred from sequence or structural similarity /// 0006355 // regulation of transcription
Interpro : DNA-dependent // inferred from electronic annotation /// 0007476 // imaginal disc-derived wing morphogenesis // inferre
FlyMine data for FBgn0020307.
BDGP gene expression has embryonic in situ data for dve: 12 pix of staining in 2 body parts.
TRiP has 1 RNAi stocks for FBgn0020307 available for purchase.
VDRC has 4 RNAi stocks for FBgn0020307 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	68 ± 1	4 of 4	2.60	Up
Head	39 ± 5	4 of 4	1.50	None
Eye	98 ± 10	4 of 4	3.77	Up
Thoracicoabdominal ganglion	85 ± 7	4 of 4	3.30	Up
Salivary gland	10 ± 3	0 of 4	0.39	Down
Crop	8 ± 2	1 of 4	0.30	Down
Midgut	268 ± 4	4 of 4	10.20	Up
Tubule	14 ± 1	3 of 4	0.60	Down
Hindgut	28 ± 2	4 of 4	1.10	None
Heart	1 ± 0	0 of 4	0.07	Down
Fat body	6 ± 2	1 of 4	0.23	Down
Ovary	0 ± 0	0 of 4	0.00	Down
Testis	4 ± 1	1 of 4	0.20	Down
Male accessory glands	326 ± 9	4 of 4	12.40	Up
Virgin spermatheca	8 ± 1	2 of 4	0.32	Down
Mated spermatheca	11 ± 1	4 of 4	0.45	Down
Adult carcass	12 ± 3	1 of 4	0.50	Down
Larval CNS	128 ± 7	4 of 4	4.88	Up
Larval Salivary gland	5 ± 1	0 of 4	0.22	Down
Larval midgut	176 ± 6	4 of 4	6.73	Up
Larval tubule	37 ± 1	4 of 4	1.40	Up
Larval hindgut	68 ± 4	4 of 4	2.61	Up
Larval fat body	4 ± 1	0 of 4	0.20	Down
Larval trachea	6 ± 1	2 of 4	0.24	Down
Larval carcass	23 ± 3	4 of 4	0.89	None
S2 cells (growing)	2 ± 0	0 of 4	0.10	Down
Whole fly	26 ± 0	4 of 4

Looking for CG5799-RB. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720