FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG5813-RB through 18771 annotations produced 1 hits

chiffon (chif):

Annotation Number : CG5813
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0000307
Gbrowse : chr2L:16343591-16352600 (-) // 100.0 //
Probeset : 1630995_at
Accessions : protein= NP_523583; /// NP_723965;, nucleotide= NM_078859; /// NM_165156;
Interpro : 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from elect
FlyMine data for FBgn0000307.
BDGP gene expression has embryonic in situ data for chif: 15 pix of staining in 14 body parts.
TRiP has 1 RNAi stocks for FBgn0000307 available for purchase.
VDRC has 3 RNAi stocks for FBgn0000307 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	129 ± 7	4 of 4	0.90	None
Head	38 ± 3	4 of 4	0.30	Down
Eye	38 ± 4	4 of 4	0.27	Down
Thoracicoabdominal ganglion	81 ± 9	4 of 4	0.60	Down
Salivary gland	23 ± 3	4 of 4	0.16	Down
Crop	92 ± 9	4 of 4	0.60	Down
Midgut	28 ± 3	4 of 4	0.20	Down
Tubule	21 ± 0	4 of 4	0.20	Down
Hindgut	47 ± 3	4 of 4	0.30	Down
Heart	31 ± 7	4 of 4	0.22	Down
Fat body	65 ± 8	4 of 4	0.46	Down
Ovary	407 ± 12	4 of 4	2.80	Up
Testis	25 ± 2	4 of 4	0.20	Down
Male accessory glands	30 ± 3	4 of 4	0.20	Down
Virgin spermatheca	28 ± 4	4 of 4	0.20	Down
Mated spermatheca	29 ± 2	4 of 4	0.21	Down
Adult carcass	31 ± 3	4 of 4	0.20	Down
Larval CNS	498 ± 70	4 of 4	3.47	Up
Larval Salivary gland	102 ± 10	4 of 4	0.71	Down
Larval midgut	40 ± 6	4 of 4	0.28	Down
Larval tubule	49 ± 9	4 of 4	0.30	Down
Larval hindgut	76 ± 6	4 of 4	0.53	Down
Larval fat body	51 ± 6	4 of 4	0.40	Down
Larval trachea	73 ± 17	4 of 4	0.51	Down
Larval carcass	80 ± 11	4 of 4	0.56	Down
S2 cells (growing)	165 ± 5	4 of 4	1.15	None
Whole fly	143 ± 9	4 of 4

Looking for CG5813-RB. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720