FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG5893-RA through 18771 annotations produced 1 hits

fish-hook (D):

Annotation Number : CG5893
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0000411
Gbrowse : chr3L:14168700-14171720 (-) // 100.0 //
Probeset : 1628604_at
Accessions : protein= NP_524066;, nucleotide= NM_079342;
Pathway : DNA-dependent // inferred from sequence or structural similarity /// 0007275 // multicellular organismal development //
Interpro : DNA-dependent // inferred from direct assay /// 0060810 // intracellular mRNA localization involved in pattern specific
FlyMine data for FBgn0000411.
BDGP gene expression has embryonic in situ data for D: 49 pix of staining in 29 body parts.
Homophila reports that CG5893 is a close match (2e-17) to human gene SOX18;HLTS (NP_060889), a gene associated with Hypotrichosis-lymphedema-telangiectasia syndrome, 607823 (3).
BioGrid reports that CG5893 interacts with CG9511 CG18024 CG18024 CG9885 CG11551 CG7771 CG10037 .
TRiP has 2 RNAi stocks for FBgn0000411 available for purchase.
VDRC has 3 RNAi stocks for FBgn0000411 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	383 ± 7	4 of 4	13.60	Up
Head	98 ± 7	4 of 4	3.50	Up
Eye	17 ± 2	4 of 4	0.62	Down
Thoracicoabdominal ganglion	73 ± 5	4 of 4	2.60	Up
Salivary gland	2441 ± 55	4 of 4	86.28	Up
Crop	38 ± 4	4 of 4	1.40	None
Midgut	3 ± 1	0 of 4	0.10	Down
Tubule	2 ± 0	0 of 4	0.10	Down
Hindgut	180 ± 8	4 of 4	6.40	Up
Heart	4 ± 1	0 of 4	0.17	Down
Fat body	8 ± 5	3 of 4	0.31	Down
Ovary	1 ± 1	0 of 4	0.10	Down
Testis	50 ± 3	4 of 4	1.80	Up
Male accessory glands	2 ± 0	0 of 4	0.10	Down
Virgin spermatheca	6 ± 1	0 of 4	0.22	Down
Mated spermatheca	4 ± 1	0 of 4	0.15	Down
Adult carcass	19 ± 5	1 of 4	0.70	None
Larval CNS	410 ± 40	4 of 4	14.50	Up
Larval Salivary gland	360 ± 33	4 of 4	12.73	Up
Larval midgut	1 ± 0	0 of 4	0.06	Down
Larval tubule	2 ± 0	0 of 4	0.10	Down
Larval hindgut	694 ± 61	4 of 4	24.54	Up
Larval fat body	8 ± 2	1 of 4	0.30	Down
Larval trachea	7 ± 4	2 of 4	0.26	Down
Larval carcass	36 ± 1	4 of 4	1.28	None
S2 cells (growing)	0 ± 0	0 of 4	0.03	Down
Whole fly	28 ± 3	4 of 4

Looking for CG5893-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720