FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG5896-RA through 18771 annotations produced 1 hits

CG5896 (grass):

Annotation Number : CG5896
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039494
Gbrowse : chr3R:22983667-22985505 (+) // 100.0 //
Probeset : 1641496_a_at
Accessions : protein= NP_651543; /// NP_733197;, nucleotide= NM_143286; /// NM_170318;
Interpro : 0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity /
FlyMine data for FBgn0039494.
BDGP gene expression has embryonic in situ data for CG5896: 16 pix of staining in 4 body parts.
Homophila reports that CG5896 is a close match (2e-11) to human gene IF (NP_000195), a gene associated with C3b inactivator deficiency (3).
TRiP has 1 RNAi stocks for FBgn0039494 available for purchase.
VDRC has 3 RNAi stocks for FBgn0039494 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	24 ± 1	4 of 4	0.50	Down
Head	252 ± 11	4 of 4	5.10	Up
Eye	347 ± 11	4 of 4	7.07	Up
Thoracicoabdominal ganglion	18 ± 2	4 of 4	0.40	Down
Salivary gland	14 ± 4	1 of 4	0.29	Down
Crop	377 ± 8	4 of 4	7.70	Up
Midgut	27 ± 2	4 of 4	0.60	Down
Tubule	21 ± 2	3 of 4	0.40	Down
Hindgut	79 ± 5	4 of 4	1.60	Up
Heart	44 ± 2	4 of 4	0.90	None
Fat body	71 ± 10	4 of 4	1.46	Up
Ovary	6 ± 1	0 of 4	0.10	Down
Testis	20 ± 2	4 of 4	0.40	Down
Male accessory glands	11 ± 2	1 of 4	0.20	Down
Virgin spermatheca	69 ± 6	4 of 4	1.42	Up
Mated spermatheca	56 ± 4	4 of 4	1.14	None
Adult carcass	240 ± 11	4 of 4	4.90	Up
Larval CNS	14 ± 2	4 of 4	0.29	Down
Larval Salivary gland	25 ± 1	3 of 4	0.52	Down
Larval midgut	33 ± 0	4 of 4	0.68	Down
Larval tubule	13 ± 2	0 of 4	0.30	Down
Larval hindgut	310 ± 22	4 of 4	6.31	Up
Larval fat body	873 ± 84	4 of 4	17.80	Up
Larval trachea	795 ± 172	4 of 4	16.18	Up
Larval carcass	279 ± 11	4 of 4	5.67	Up
S2 cells (growing)	406 ± 7	4 of 4	8.27	Up
Whole fly	49 ± 3	4 of 4

Looking for CG5896-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720