FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG5935-RA through 18771 annotations produced 1 hits

Dek (Dek):

Annotation Number : CG5935
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0026533
Gbrowse : chr2R:12743725-12747857 (+) // 99.84 //
Probeset : 1628041_a_at
Accessions : protein= NP_652058; /// NP_725621; /// NP_725622; /// NP_995861;, nucleotide= NM_143801; /// NM_166198; /// NM_166199; /// NM_206139;
Pathway : 0005634 // nucleus // non-traceable author statement
Interpro : 0003676 // nucleic acid binding // inferred from electronic annotation
FlyMine data for FBgn0026533.
BioGrid reports that CG5935 interacts with CG3978 CG3978 .
TRiP has 2 RNAi stocks for FBgn0026533 available for purchase.
VDRC has 2 RNAi stocks for FBgn0026533 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	564 ± 9	4 of 4	1.00	None
Head	317 ± 14	4 of 4	0.60	Down
Eye	585 ± 41	4 of 4	1.03	None
Thoracicoabdominal ganglion	368 ± 14	4 of 4	0.70	Down
Salivary gland	687 ± 14	4 of 4	1.21	Up
Crop	459 ± 5	4 of 4	0.80	Down
Midgut	330 ± 5	4 of 4	0.60	Down
Tubule	619 ± 20	4 of 4	1.10	Up
Hindgut	440 ± 7	4 of 4	0.80	Down
Heart	530 ± 12	4 of 4	0.94	None
Fat body	317 ± 11	4 of 4	0.56	Down
Ovary	1236 ± 28	4 of 4	2.20	Up
Testis	167 ± 5	4 of 4	0.30	Down
Male accessory glands	958 ± 31	4 of 4	1.70	Up
Virgin spermatheca	414 ± 10	4 of 4	0.73	Down
Mated spermatheca	442 ± 17	4 of 4	0.78	Down
Adult carcass	309 ± 13	4 of 4	0.50	Down
Larval CNS	966 ± 50	4 of 4	1.71	Up
Larval Salivary gland	935 ± 23	4 of 4	1.65	Up
Larval midgut	333 ± 4	4 of 4	0.59	Down
Larval tubule	429 ± 10	4 of 4	0.80	Down
Larval hindgut	432 ± 6	4 of 4	0.76	Down
Larval fat body	375 ± 13	4 of 4	0.70	Down
Larval trachea	1131 ± 53	4 of 4	2.00	Up
Larval carcass	440 ± 17	4 of 4	0.78	Down
S2 cells (growing)	939 ± 39	4 of 4	1.66	Up
Whole fly	566 ± 25	4 of 4

Looking for CG5935-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720