FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG5972-RA through 18771 annotations produced 1 hits

p20 subunit of Arp2/3 (Arc-p20):

Annotation Number : CG5972
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031781
Gbrowse : chr2L:6125137-6125913 (+) // 100.0 //
Probeset : 1636770_at
Accessions : protein= NP_608996;, nucleotide= NM_135152;
Pathway : engulfment // inferred from mutant phenotype /// 0008360 // regulation of cell shape // inferred from mutant phenotype
Interpro : 0005856 // cytoskeleton // inferred from electronic annotation
FlyMine data for FBgn0031781.
BDGP gene expression has embryonic in situ data for CG5972: 4 pix of staining in 1 body parts.
BioGrid reports that CG5972 interacts with CG9881 CG9949 .
TRiP has 2 RNAi stocks for FBgn0031781 available for purchase.
VDRC has 1 RNAi stocks for FBgn0031781 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	364 ± 6	4 of 4	1.00	None
Head	365 ± 6	4 of 4	1.00	None
Eye	715 ± 26	4 of 4	2.00	Up
Thoracicoabdominal ganglion	430 ± 18	4 of 4	1.20	Up
Salivary gland	822 ± 65	4 of 4	2.29	Up
Crop	519 ± 9	4 of 4	1.40	Up
Midgut	835 ± 25	4 of 4	2.30	Up
Tubule	411 ± 13	4 of 4	1.10	Up
Hindgut	570 ± 22	4 of 4	1.60	Up
Heart	378 ± 6	4 of 4	1.06	None
Fat body	124 ± 19	4 of 4	0.35	Down
Ovary	394 ± 13	4 of 4	1.10	None
Testis	107 ± 6	4 of 4	0.30	Down
Male accessory glands	963 ± 26	4 of 4	2.70	Up
Virgin spermatheca	367 ± 12	4 of 4	1.03	None
Mated spermatheca	426 ± 36	4 of 4	1.19	None
Adult carcass	243 ± 10	4 of 4	0.70	Down
Larval CNS	714 ± 30	4 of 4	1.99	Up
Larval Salivary gland	1260 ± 37	4 of 4	3.52	Up
Larval midgut	873 ± 42	4 of 4	2.43	Up
Larval tubule	683 ± 17	4 of 4	1.90	Up
Larval hindgut	687 ± 11	4 of 4	1.92	Up
Larval fat body	309 ± 28	4 of 4	0.90	None
Larval trachea	1051 ± 48	4 of 4	2.93	Up
Larval carcass	528 ± 22	4 of 4	1.47	Up
S2 cells (growing)	1032 ± 20	4 of 4	2.88	Up
Whole fly	358 ± 17	4 of 4

Looking for CG5972-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720