FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG5984-RA through 18771 annotations produced 1 hits

Filamin-like (CG5984):

Annotation Number : CG5984
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039500
Gbrowse : chr3R:23072581-23073540 (-) // 100.0 //
Probeset : 1629680_at
Accessions : protein= NP_651548;, nucleotide= NM_143291;
Interpro : 0003779 // actin binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred f
FlyMine data for FBgn0039500.
Homophila reports that CG5984 is a close match (2e-21) to human gene ABPX;FLN1;FLNA;FMD;MNS;NHBP;OPD1;OPD2 (NP_001447), a gene associated with Frontometaphyseal dysplasia, 304120 (3);Heterotopia, periventricular nodular, with frontometaphyseal dysplasia, 300049 (3);Heterotopia, periventricular, 300049 (3);Heterotopia, periventricular, ED variant, 300537 (3);Melnick-Needles syndrome, 309350 (3);Otopalatodigital syndrome, type I, 311300 (3);Otopalatodigital syndrome, type II, 304120 (3).
VDRC has 2 RNAi stocks for FBgn0039500 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	0 ± 0	0 of 4	0.50	Down
Head	0 ± 0	0 of 4	0.90	None
Eye	2 ± 1	0 of 4	3.03	None
Thoracicoabdominal ganglion	0 ± 0	0 of 4	1.00	None
Salivary gland	1 ± 0	0 of 4	1.78	Up
Crop	13 ± 1	1 of 4	16.50	Up
Midgut	1 ± 0	0 of 4	1.50	Up
Tubule	0 ± 0	0 of 4	0.90	None
Hindgut	1 ± 0	0 of 4	2.20	Up
Heart	7 ± 2	0 of 4	9.03	None
Fat body	1 ± 0	0 of 4	1.41	None
Ovary	0 ± 0	0 of 4	1.00	None
Testis	0 ± 0	0 of 4	0.70	None
Male accessory glands	7 ± 2	0 of 4	9.40	None
Virgin spermatheca	0 ± 0	0 of 4	0.84	None
Mated spermatheca	0 ± 0	0 of 4	0.75	None
Adult carcass	1 ± 0	0 of 4	1.70	None
Larval CNS	0 ± 0	0 of 4	0.81	None
Larval Salivary gland	1 ± 0	0 of 4	2.06	Up
Larval midgut	1 ± 0	0 of 4	1.44	None
Larval tubule	0 ± 0	0 of 4	1.00	None
Larval hindgut	1 ± 0	0 of 4	1.91	None
Larval fat body	1 ± 0	0 of 4	1.70	None
Larval trachea	1 ± 1	0 of 4	2.25	None
Larval carcass	1 ± 0	0 of 4	1.31	None
S2 cells (growing)	1 ± 0	0 of 4	1.34	None
Whole fly	0 ± 0	0 of 4

Looking for CG5984-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720