FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG5992-RA through 18771 annotations produced 1 hits

Adenosine deaminase-related growth factor A (Adgf-A):

Annotation Number : CG5992
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036752
Gbrowse : chr3L:17744830-17757253 (-) // 99.5 //
Probeset : 1624054_at
Accessions : protein= NP_524130; /// NP_996119;, nucleotide= NM_079406; /// NM_206397;
Pathway : 0005615 // extracellular space // inferred from electronic annotation /// 0005615 // extracellular space // non-traceabl
Interpro : 0004000 // adenosine deaminase activity // inferred from direct assay /// 0004000 // adenosine deaminase activity // inf
FlyMine data for FBgn0036752.
BDGP gene expression has embryonic in situ data for Adgf-A: 43 pix of staining in 18 body parts.
VDRC has 4 RNAi stocks for FBgn0036752 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	8 ± 1	0 of 4	0.10	Down
Head	77 ± 4	4 of 4	0.60	Down
Eye	4 ± 1	2 of 4	0.03	Down
Thoracicoabdominal ganglion	5 ± 1	0 of 4	0.00	Down
Salivary gland	10 ± 2	0 of 4	0.08	Down
Crop	80 ± 5	4 of 4	0.60	Down
Midgut	1158 ± 19	4 of 4	8.90	Up
Tubule	38 ± 9	4 of 4	0.30	Down
Hindgut	305 ± 11	4 of 4	2.40	Up
Heart	198 ± 13	4 of 4	1.53	Up
Fat body	21 ± 4	1 of 4	0.17	Down
Ovary	76 ± 2	4 of 4	0.60	Down
Testis	92 ± 1	4 of 4	0.70	Down
Male accessory glands	2 ± 1	0 of 4	0.00	Down
Virgin spermatheca	85 ± 7	4 of 4	0.66	Down
Mated spermatheca	85 ± 15	4 of 4	0.66	None
Adult carcass	37 ± 2	3 of 4	0.30	Down
Larval CNS	122 ± 15	4 of 4	0.94	None
Larval Salivary gland	27 ± 2	4 of 4	0.21	Down
Larval midgut	850 ± 29	4 of 4	6.56	Up
Larval tubule	209 ± 7	4 of 4	1.60	Up
Larval hindgut	103 ± 7	4 of 4	0.79	None
Larval fat body	56 ± 5	4 of 4	0.40	Down
Larval trachea	20 ± 3	4 of 4	0.16	Down
Larval carcass	43 ± 0	4 of 4	0.33	Down
S2 cells (growing)	254 ± 13	4 of 4	1.96	Up
Whole fly	129 ± 11	4 of 4

Looking for CG5992-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720