Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

 University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)

Searching for CG5998-RA through 18771 annotations produced 1 hits


Adenosine deaminase-related growth factor B (Adgf-B):

Annotation Number : CG5998
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036751
Gbrowse : chr3L:17741932-17743688 (-) // 100.0 //
Probeset : 1638046_at
Accessions : protein= NP_649006;, nucleotide= NM_140749;
Pathway : 0005615 // extracellular space // inferred from electronic annotation
Interpro : 0004000 // adenosine deaminase activity // non-traceable author statement /// 0004000 // adenosine deaminase activity //
FlyMine data for FBgn0036751.
VDRC has 3 RNAi stocks for FBgn0036751 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain3 ± 10 of 4 0.10Down
Head2 ± 00 of 4 0.10Down
Eye2 ± 10 of 4 0.07Down
Thoracicoabdominal ganglion8 ± 40 of 4 0.20Down
Salivary gland6 ± 20 of 4 0.18Down
Crop2 ± 00 of 4 0.10Down
Midgut2 ± 00 of 4 0.10Down
Tubule4 ± 00 of 4 0.10Down
Hindgut4 ± 00 of 4 0.10Down
Heart1 ± 00 of 4 0.04Down
Fat body4 ± 40 of 4 0.13Down
Ovary3 ± 10 of 4 0.10Down
Testis439 ± 134 of 412.20Up
Male accessory glands7 ± 30 of 4 0.20Down
Virgin spermatheca2 ± 00 of 4 0.06Down
Mated spermatheca4 ± 20 of 4 0.13Down
Adult carcass7 ± 20 of 4 0.20Down
Larval CNS4 ± 30 of 4 0.11Down
Larval Salivary gland6 ± 20 of 4 0.19Down
Larval midgut2 ± 00 of 4 0.07Down
Larval tubule9 ± 30 of 4 0.30Down
Larval hindgut5 ± 10 of 4 0.15Down
Larval fat body29 ± 81 of 4 0.80None
Larval trachea2 ± 30 of 4 0.08Down
Larval carcass3 ± 00 of 4 0.09Down
S2 cells (growing)9 ± 20 of 4 0.26Down
Whole fly35 ± 24 of 4

Looking for CG5998-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime