FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG6056-RA through 18771 annotations produced 1 hits

AP-2sigma (AP-2sigma):

Annotation Number : CG6056
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0043012
Gbrowse : chr3R:17094930-17095799 (-) // 100.0 //
Probeset : 1627202_at
Accessions : protein= NP_650961;, nucleotide= NM_142704;
Pathway : 0008021 // synaptic vesicle // traceable author statement /// 0030117 // membrane coat // inferred from electronic annot
Interpro : 0005515 // protein binding // inferred from electronic annotation /// 0008565 // protein transporter activity // inferre
FlyMine data for FBgn0043012.
BDGP gene expression has embryonic in situ data for AP-2sigma: 11 pix of staining in 8 body parts.
Homophila reports that CG6056 is a close match (8e-33) to human gene AP1S2;MRX59 (NP_003907), a gene associated with Mental retardation, X-linked 59, 300630 (3).
TRiP has 1 RNAi stocks for FBgn0043012 available for purchase.
VDRC has 2 RNAi stocks for FBgn0043012 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	983 ± 18	4 of 4	2.60	Up
Head	563 ± 19	4 of 4	1.50	Up
Eye	570 ± 16	4 of 4	1.54	Up
Thoracicoabdominal ganglion	1019 ± 44	4 of 4	2.70	Up
Salivary gland	468 ± 27	4 of 4	1.26	Up
Crop	398 ± 11	4 of 4	1.10	None
Midgut	358 ± 13	4 of 4	1.00	None
Tubule	570 ± 23	4 of 4	1.50	Up
Hindgut	454 ± 12	4 of 4	1.20	Up
Heart	920 ± 28	4 of 4	2.48	Up
Fat body	336 ± 16	4 of 4	0.90	Down
Ovary	534 ± 5	4 of 4	1.40	Up
Testis	161 ± 3	4 of 4	0.40	Down
Male accessory glands	243 ± 16	4 of 4	0.70	Down
Virgin spermatheca	284 ± 4	4 of 4	0.77	Down
Mated spermatheca	259 ± 8	4 of 4	0.70	Down
Adult carcass	349 ± 7	4 of 4	0.90	None
Larval CNS	850 ± 36	4 of 4	2.29	Up
Larval Salivary gland	856 ± 57	4 of 4	2.30	Up
Larval midgut	354 ± 4	4 of 4	0.95	None
Larval tubule	1065 ± 18	4 of 4	2.90	Up
Larval hindgut	555 ± 18	4 of 4	1.50	Up
Larval fat body	786 ± 81	4 of 4	2.10	Up
Larval trachea	618 ± 26	4 of 4	1.66	Up
Larval carcass	530 ± 31	4 of 4	1.43	Up
S2 cells (growing)	370 ± 7	4 of 4	1.00	None
Whole fly	371 ± 9	4 of 4

Looking for CG6056-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720