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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG6058-RB through 18771 annotations produced 1 hits



aldolase (Ald):

Annotation Number : CG6058
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0000064
Gbrowse : chr3R:22080403-22087313 (-) // 100.0 //
Probeset : 1631993_s_at
Accessions : protein= NP_524515; /// NP_733141; /// NP_733142; /// NP_733143; /// NP_733145; /// NP_996300;, nucleotide= NM_079791; /// NM_170262; /// NM_170263; /// NM_170264; /// NM_170266; /// NM_206577;
Interpro : 0003824 // catalytic activity // inferred from electronic annotation /// 0004332 // fructose-bisphosphate aldolase activ
FlyMine data for FBgn0000064.
Homophila reports that CG6058 is a close match (8e-119) to human gene ALDOB (NP_000026), a gene associated with Fructose intolerance (3).
BioGrid reports that CG6058 interacts with CG6058 CG8291 CG9754 .
TRiP has 1 RNAi stocks for FBgn0000064 available for purchase.
VDRC has 5 RNAi stocks for FBgn0000064 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1460 ± 924 of 4 0.90None
Head1769 ± 1524 of 4 1.10None
Eye1081 ± 354 of 4 0.66None
Thoracicoabdominal ganglion1636 ± 484 of 4 1.00None
Salivary gland3928 ± 2994 of 4 2.39Up
Crop1955 ± 394 of 4 1.20None
Midgut1404 ± 754 of 4 0.90None
Tubule1569 ± 924 of 4 1.00None
Hindgut1922 ± 884 of 4 1.20None
Heart1685 ± 974 of 4 1.03None
Fat body3443 ± 1274 of 4 2.09Up
Ovary990 ± 154 of 4 0.60Down
Testis264 ± 134 of 4 0.20Down
Male accessory glands1355 ± 204 of 4 0.80None
Virgin spermatheca3605 ± 1194 of 4 2.19Up
Mated spermatheca3176 ± 2104 of 4 1.93Up
Adult carcass2761 ± 634 of 4 1.70Up
Larval CNS2098 ± 1564 of 4 1.28None
Larval Salivary gland656 ± 644 of 4 0.40Down
Larval midgut1486 ± 614 of 4 0.90None
Larval tubule588 ± 454 of 4 0.40Down
Larval hindgut2414 ± 1024 of 4 1.47Up
Larval fat body1610 ± 1244 of 4 1.00None
Larval trachea654 ± 1174 of 4 0.40Down
Larval carcass3670 ± 3234 of 4 2.23Up
S2 cells (growing)747 ± 504 of 4 0.45Down
Whole fly1644 ± 1964 of 4

Looking for CG6058-RB. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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