FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG6117-RB through 18771 annotations produced 1 hits

Protein-kinase-like-72A (Pka-C3):

Annotation Number : CG6117
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0000489
Gbrowse : chr3L:15918903-15947897 (-) // 100.0 //
Probeset : 1635928_a_at
Accessions : protein= NP_524097; /// NP_730083;, nucleotide= NM_079373; /// NM_168638;
Pathway : 0005952 // cAMP-dependent protein kinase complex // inferred from sequence or structural similarity
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred
FlyMine data for FBgn0000489.
BDGP gene expression has embryonic in situ data for Pka-C3: 57 pix of staining in 12 body parts.
Homophila reports that CG6117 is a close match (7e-11) to human gene BEK;CFD1;FGFR2;JWS (NP_075259), a gene associated with Antley-Bixler syndrome, 207410 (;Apert syndrome, 101200 (3);Beare-Stevenson cutis gyrata syndrome, 123790 (3);Craniofacial-skeletal-dermatologic dysplasia (3);Craniosynostosis, nonspecific (3);Crouzon syndrome, 123500 (3);Gastric cancer, somatic, 137215 (3);Jackson-Weiss syndrome, 123150 (3);Pfeiffer syndrome, 101600 (3);Saethre-Chotzen syndrome, 101400 (3).
TRiP has 2 RNAi stocks for FBgn0000489 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	276 ± 9	4 of 4	1.20	None
Head	278 ± 16	4 of 4	1.20	None
Eye	1164 ± 73	4 of 4	5.00	Up
Thoracicoabdominal ganglion	40 ± 4	4 of 4	0.20	Down
Salivary gland	11 ± 4	0 of 4	0.05	Down
Crop	774 ± 22	4 of 4	3.30	Up
Midgut	59 ± 2	4 of 4	0.30	Down
Tubule	473 ± 160	4 of 4	2.00	None
Hindgut	988 ± 10	4 of 4	4.20	Up
Heart	378 ± 34	4 of 4	1.62	Up
Fat body	34 ± 4	4 of 4	0.15	Down
Ovary	63 ± 9	4 of 4	0.30	Down
Testis	544 ± 32	4 of 4	2.30	Up
Male accessory glands	184 ± 6	4 of 4	0.80	Down
Virgin spermatheca	89 ± 8	4 of 4	0.38	Down
Mated spermatheca	140 ± 17	4 of 4	0.60	Down
Adult carcass	352 ± 16	4 of 4	1.50	Up
Larval CNS	25 ± 3	4 of 4	0.11	Down
Larval Salivary gland	7 ± 2	0 of 4	0.03	Down
Larval midgut	67 ± 5	4 of 4	0.29	Down
Larval tubule	818 ± 46	4 of 4	3.50	Up
Larval hindgut	137 ± 2	4 of 4	0.59	Down
Larval fat body	56 ± 21	2 of 4	0.20	Down
Larval trachea	72 ± 59	4 of 4	0.31	Down
Larval carcass	651 ± 19	4 of 4	2.80	Up
S2 cells (growing)	121 ± 10	4 of 4	0.52	Down
Whole fly	233 ± 13	4 of 4

Looking for CG6117-RB. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720