FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG6146-RA through 18771 annotations produced 1 hits

topoisomerase I (Top1):

Annotation Number : CG6146
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0004924
Gbrowse : chrX:15213524-15220302 (+) // 100.0 //
Probeset : 1634104_a_at
Accessions : protein= NP_001014742; /// NP_511161; /// NP_727841;, nucleotide= NM_001014742; /// NM_078606; /// NM_167435;
Pathway : "0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005
Interpro : core complex // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation /// 0005703
FlyMine data for FBgn0004924.
Homophila reports that CG6146 is a close match (0) to human gene TOP1 (NP_003277), a gene associated with DNA topoisomerase I, camptothecin-resistant (3).
BioGrid reports that CG6146 interacts with CG9060 .
TRiP has 1 RNAi stocks for FBgn0004924 available for purchase.
VDRC has 1 RNAi stocks for FBgn0004924 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	71 ± 1	4 of 4	0.20	Down
Head	63 ± 10	4 of 4	0.20	Down
Eye	26 ± 1	3 of 4	0.08	Down
Thoracicoabdominal ganglion	58 ± 10	3 of 4	0.20	Down
Salivary gland	115 ± 3	0 of 4	0.36	Down
Crop	101 ± 4	4 of 4	0.30	Down
Midgut	90 ± 1	4 of 4	0.30	Down
Tubule	84 ± 7	4 of 4	0.30	Down
Hindgut	74 ± 3	2 of 4	0.20	Down
Heart	55 ± 1	4 of 4	0.17	Down
Fat body	128 ± 16	4 of 4	0.40	Down
Ovary	974 ± 20	4 of 4	3.00	Up
Testis	167 ± 5	4 of 4	0.50	Down
Male accessory glands	116 ± 11	4 of 4	0.40	Down
Virgin spermatheca	40 ± 2	2 of 4	0.13	Down
Mated spermatheca	44 ± 3	3 of 4	0.14	Down
Adult carcass	114 ± 10	2 of 4	0.40	Down
Larval CNS	108 ± 12	4 of 4	0.34	Down
Larval Salivary gland	151 ± 14	4 of 4	0.47	Down
Larval midgut	71 ± 1	4 of 4	0.22	Down
Larval tubule	106 ± 3	4 of 4	0.30	Down
Larval hindgut	110 ± 6	4 of 4	0.35	Down
Larval fat body	137 ± 11	4 of 4	0.40	Down
Larval trachea	87 ± 11	4 of 4	0.27	Down
Larval carcass	125 ± 9	3 of 4	0.39	Down
S2 cells (growing)	215 ± 5	4 of 4	0.67	Down
Whole fly	320 ± 33	4 of 4

Looking for CG6146-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720