FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG6147-RA through 18771 annotations produced 1 hits

TSC1 (Tsc1):

Annotation Number : CG6147
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0026317
Gbrowse : chr3R:19956031-19960376 (+) // 100.0 //
Probeset : 1640930_at
Accessions : protein= NP_477415;, nucleotide= NM_058067;
Pathway : 0005737 // cytoplasm // inferred from direct assay
Interpro : 0005515 // protein binding // inferred from physical interaction /// 0019900 // kinase binding // inferred from physical
FlyMine data for FBgn0026317.
BDGP gene expression has embryonic in situ data for Tsc1: 4 pix of staining in 1 body parts.
Homophila reports that CG6147 is a close match (2e-39) to human gene LAM;TSC1 (NP_000359), a gene associated with Focal cortical dysplasia, Taylor balloon cell type, 607341 (3);Lymphangioleiomyomatosis, 606690 (3);Tuberous sclerosis-1, 191100 (3).
BioGrid reports that CG6147 interacts with CG8975 CG9028 CG6975 CG6975 CG6975 CG6975 CG4006 CG4006 CG4006 CG18402 CG18402 CG10539 CG10539 CG5092 CG5092 CG5092 .
TRiP has 3 RNAi stocks for FBgn0026317 available for purchase.
VDRC has 2 RNAi stocks for FBgn0026317 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	178 ± 10	4 of 4	1.10	None
Head	109 ± 8	4 of 4	0.60	Down
Eye	83 ± 4	4 of 4	0.49	Down
Thoracicoabdominal ganglion	209 ± 13	4 of 4	1.20	None
Salivary gland	153 ± 6	4 of 4	0.91	None
Crop	164 ± 4	4 of 4	1.00	None
Midgut	129 ± 4	4 of 4	0.80	Down
Tubule	96 ± 5	4 of 4	0.60	Down
Hindgut	134 ± 9	4 of 4	0.80	None
Heart	72 ± 4	4 of 4	0.43	Down
Fat body	188 ± 36	4 of 4	1.11	None
Ovary	411 ± 11	4 of 4	2.40	Up
Testis	86 ± 4	4 of 4	0.50	Down
Male accessory glands	250 ± 10	4 of 4	1.50	Up
Virgin spermatheca	245 ± 21	4 of 4	1.45	Up
Mated spermatheca	249 ± 8	4 of 4	1.48	Up
Adult carcass	122 ± 7	4 of 4	0.70	Down
Larval CNS	231 ± 22	4 of 4	1.37	Up
Larval Salivary gland	221 ± 11	4 of 4	1.31	Up
Larval midgut	138 ± 2	4 of 4	0.82	None
Larval tubule	139 ± 3	4 of 4	0.80	None
Larval hindgut	183 ± 3	4 of 4	1.09	None
Larval fat body	135 ± 4	4 of 4	0.80	None
Larval trachea	80 ± 9	4 of 4	0.48	Down
Larval carcass	194 ± 15	4 of 4	1.15	None
S2 cells (growing)	180 ± 10	4 of 4	1.07	None
Whole fly	169 ± 11	4 of 4

Looking for CG6147-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720