FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG6177-RA through 18771 annotations produced 1 hits

ldlCp-related protein (ldlCp):

Annotation Number : CG6177
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0026634
Gbrowse : chr3R:11184189-11187396 (-) // 100.0 //
Probeset : 1633420_at
Accessions : protein= NP_524366;, nucleotide= NM_079642;
Pathway : 0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electro
Interpro : 0008565 // protein transporter activity // inferred from sequence or structural similarity
FlyMine data for FBgn0026634.
BDGP gene expression has embryonic in situ data for ldlCp: 8 pix of staining in 7 body parts.
BioGrid reports that CG6177 interacts with CG9014 .
VDRC has 2 RNAi stocks for FBgn0026634 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	26 ± 1	4 of 4	1.60	Up
Head	22 ± 2	4 of 4	1.40	None
Eye	25 ± 2	4 of 4	1.61	Up
Thoracicoabdominal ganglion	40 ± 2	4 of 4	2.50	Up
Salivary gland	72 ± 3	4 of 4	4.47	Up
Crop	27 ± 2	4 of 4	1.70	Up
Midgut	15 ± 2	0 of 4	1.00	None
Tubule	32 ± 1	4 of 4	2.00	Up
Hindgut	36 ± 2	4 of 4	2.20	Up
Heart	53 ± 2	4 of 4	3.34	Up
Fat body	56 ± 6	4 of 4	3.54	Up
Ovary	16 ± 1	4 of 4	1.00	None
Testis	5 ± 1	0 of 4	0.40	Down
Male accessory glands	27 ± 3	1 of 4	1.70	Up
Virgin spermatheca	40 ± 3	4 of 4	2.51	Up
Mated spermatheca	37 ± 2	4 of 4	2.34	Up
Adult carcass	24 ± 3	4 of 4	1.50	None
Larval CNS	42 ± 3	4 of 4	2.62	Up
Larval Salivary gland	33 ± 2	4 of 4	2.05	Up
Larval midgut	18 ± 2	3 of 4	1.15	None
Larval tubule	17 ± 1	3 of 4	1.10	None
Larval hindgut	66 ± 3	4 of 4	4.10	Up
Larval fat body	13 ± 3	1 of 4	0.90	None
Larval trachea	10 ± 1	4 of 4	0.63	None
Larval carcass	11 ± 2	4 of 4	0.74	None
S2 cells (growing)	9 ± 1	0 of 4	0.56	None
Whole fly	16 ± 2	4 of 4

Looking for CG6177-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720