FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG6195-RA through 18771 annotations produced 1 hits

March 2006 (FlyBase/BDGP 5.3) (chr3R:15472640-15474224 (-) // 100.0 //):

Annotation Number : CG6195
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID :
Gbrowse :
Probeset : 1638796_at
Accessions : protein= , nucleotide=

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	126 ± 2	4 of 4	0.80	Down
Head	121 ± 5	4 of 4	0.70	Down
Eye	161 ± 7	4 of 4	0.98	None
Thoracicoabdominal ganglion	126 ± 10	4 of 4	0.80	Down
Salivary gland	141 ± 8	4 of 4	0.85	None
Crop	127 ± 3	4 of 4	0.80	Down
Midgut	165 ± 5	4 of 4	1.00	None
Tubule	95 ± 4	4 of 4	0.60	Down
Hindgut	117 ± 2	4 of 4	0.70	Down
Heart	115 ± 6	4 of 4	0.70	Down
Fat body	120 ± 16	4 of 4	0.73	Down
Ovary	233 ± 10	4 of 4	1.40	Up
Testis	124 ± 4	4 of 4	0.80	Down
Male accessory glands	252 ± 6	4 of 4	1.50	Up
Virgin spermatheca	149 ± 6	4 of 4	0.90	None
Mated spermatheca	166 ± 6	4 of 4	1.01	None
Adult carcass	121 ± 9	4 of 4	0.70	Down
Larval CNS	207 ± 3	4 of 4	1.26	Up
Larval Salivary gland	265 ± 18	4 of 4	1.61	Up
Larval midgut	114 ± 7	4 of 4	0.69	Down
Larval tubule	171 ± 6	4 of 4	1.00	None
Larval hindgut	143 ± 5	4 of 4	0.87	None
Larval fat body	166 ± 6	4 of 4	1.00	None
Larval trachea	249 ± 17	4 of 4	1.51	Up
Larval carcass	170 ± 7	4 of 4	1.03	None
S2 cells (growing)	160 ± 3	4 of 4	0.97	None
Whole fly	165 ± 7	4 of 4

Looking for CG6195-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720