Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG6206-RA through 18771 annotations produced 1 hits



lysosomal mannosidase /// (CG6206 /// DsimCG6206):

Annotation Number : CG6206
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0027611
Gbrowse : chr2L:10457655-10462475 (+) // 100.0 //
Probeset : 1635125_a_at
Accessions : protein= NP_609408; /// NP_723591;, nucleotide= NM_135564; /// NM_164929;
Pathway : 0005764 // lysosome // inferred from sequence or structural similarity
Interpro : "0003824 // catalytic activity // inferred from electronic annotation /// 0004553 // hydrolase activity
FlyMine data for FBgn0027611.
BDGP gene expression has embryonic in situ data for BcDNA:GH02419: 38 pix of staining in 10 body parts.
Homophila reports that CG6206 is a close match (0) to human gene MAN2B1;MANB (NP_000519), a gene associated with Mannosidosis, alpha-, types I and II, 248500 (3).
BioGrid reports that CG6206 interacts with CG6707 .
TRiP has 1 RNAi stocks for FBgn0027611 available for purchase.
VDRC has 3 RNAi stocks for FBgn0027611 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain447 44 of 4 0.80None
Head1119 964 of 4 2.00Up
Eye399 374 of 4 0.70Down
Thoracicoabdominal ganglion579 244 of 4 1.00None
Salivary gland71 114 of 4 0.13Down
Crop72 54 of 4 0.10Down
Midgut2749 1764 of 4 4.80Up
Tubule22 32 of 4 0.00Down
Hindgut126 64 of 4 0.20Down
Heart1171 904 of 4 2.05Up
Fat body1454 1504 of 4 2.55Up
Ovary83 74 of 4 0.10Down
Testis101 54 of 4 0.20Down
Male accessory glands79 64 of 4 0.10Down
Virgin spermatheca2119 444 of 4 3.71Up
Mated spermatheca1631 934 of 4 2.86Up
Adult carcass1079 514 of 4 1.90Up
Larval CNS177 104 of 4 0.31Down
Larval Salivary gland43 54 of 4 0.08Down
Larval midgut1449 1244 of 4 2.54Up
Larval tubule234 354 of 4 0.40Down
Larval hindgut54 64 of 4 0.10Down
Larval fat body4512 5004 of 4 7.90Up
Larval trachea154 234 of 4 0.27Down
Larval carcass146 134 of 4 0.26Down
S2 cells (growing)164 44 of 4 0.29Down
Whole fly570 424 of 4

Looking for CG6206-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime