FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG6217-RA through 18771 annotations produced 1 hits

knickkopf (knk):

Annotation Number : CG6217
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0001321
Gbrowse : chr3R:5948080-5951383 (-) // 100.0 //
Probeset : 1624121_at
Accessions : protein= NP_649981;, nucleotide= NM_141724;
Pathway : open tracheal system // inferred from mutant phenotype /// 0035152 // regulation of tube architecture
Interpro : open tracheal system // inferred from mutant phenotype /// 0035158 // regulation of tube diameter
FlyMine data for FBgn0001321.
BDGP gene expression has embryonic in situ data for knk: 8 pix of staining in 10 body parts.
VDRC has 3 RNAi stocks for FBgn0001321 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	5 ± 1	0 of 4	0.30	Down
Head	35 ± 2	4 of 4	1.90	Up
Eye	17 ± 1	4 of 4	0.97	None
Thoracicoabdominal ganglion	10 ± 2	0 of 4	0.60	None
Salivary gland	21 ± 4	0 of 4	1.19	None
Crop	60 ± 2	4 of 4	3.40	Up
Midgut	18 ± 5	0 of 4	1.00	None
Tubule	12 ± 2	1 of 4	0.70	Down
Hindgut	186 ± 3	4 of 4	10.40	Up
Heart	7 ± 1	1 of 4	0.44	Down
Fat body	12 ± 4	1 of 4	0.69	None
Ovary	6 ± 1	0 of 4	0.40	Down
Testis	15 ± 1	4 of 4	0.80	None
Male accessory glands	10 ± 1	0 of 4	0.60	None
Virgin spermatheca	14 ± 2	3 of 4	0.82	None
Mated spermatheca	26 ± 2	4 of 4	1.44	None
Adult carcass	33 ± 3	3 of 4	1.90	Up
Larval CNS	13 ± 2	4 of 4	0.74	None
Larval Salivary gland	17 ± 0	4 of 4	0.97	None
Larval midgut	20 ± 3	1 of 4	1.16	None
Larval tubule	12 ± 1	3 of 4	0.70	None
Larval hindgut	372 ± 7	4 of 4	20.68	Up
Larval fat body	14 ± 2	0 of 4	0.80	None
Larval trachea	545 ± 7	4 of 4	30.33	Up
Larval carcass	347 ± 2	4 of 4	19.29	Up
S2 cells (growing)	9 ± 2	0 of 4	0.51	None
Whole fly	18 ± 2	3 of 4

Looking for CG6217-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720