FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG6223-RA through 18771 annotations produced 1 hits

beta-coatomer protein (betaCop):

Annotation Number : CG6223
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0008635
Gbrowse : chrX:18275579-18279228 (-) // 100.0 //
Probeset : 1626340_at
Accessions : protein= NP_523400;, nucleotide= NM_078676;
Pathway : Golgi to ER // inferred from sequence or structural similarity /// 0006890 // retrograde vesicle-mediated transport
Interpro : Golgi to ER // non-traceable author statement /// 0006911 // phagocytosis
FlyMine data for FBgn0008635.
BDGP gene expression has embryonic in situ data for betaCop: 10 pix of staining in 10 body parts.
TRiP has 2 RNAi stocks for FBgn0008635 available for purchase.
VDRC has 3 RNAi stocks for FBgn0008635 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	231 ± 7	4 of 4	0.90	None
Head	289 ± 5	4 of 4	1.10	None
Eye	329 ± 6	4 of 4	1.28	Up
Thoracicoabdominal ganglion	261 ± 10	4 of 4	1.00	None
Salivary gland	2516 ± 155	4 of 4	9.80	Up
Crop	279 ± 6	4 of 4	1.10	None
Midgut	403 ± 11	4 of 4	1.60	Up
Tubule	382 ± 30	4 of 4	1.50	Up
Hindgut	272 ± 5	4 of 4	1.10	None
Heart	242 ± 4	4 of 4	0.94	None
Fat body	390 ± 49	4 of 4	1.52	Up
Ovary	282 ± 9	4 of 4	1.10	None
Testis	100 ± 0	4 of 4	0.40	Down
Male accessory glands	1857 ± 63	4 of 4	7.20	Up
Virgin spermatheca	544 ± 18	4 of 4	2.12	Up
Mated spermatheca	648 ± 47	4 of 4	2.53	Up
Adult carcass	319 ± 15	4 of 4	1.20	Up
Larval CNS	388 ± 13	4 of 4	1.51	Up
Larval Salivary gland	2760 ± 80	4 of 4	10.76	Up
Larval midgut	450 ± 11	4 of 4	1.75	Up
Larval tubule	469 ± 6	4 of 4	1.80	Up
Larval hindgut	496 ± 24	4 of 4	1.93	Up
Larval fat body	466 ± 39	4 of 4	1.80	Up
Larval trachea	446 ± 70	4 of 4	1.74	Up
Larval carcass	425 ± 10	4 of 4	1.66	Up
S2 cells (growing)	1112 ± 24	4 of 4	4.33	Up
Whole fly	256 ± 16	4 of 4

Looking for CG6223-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720