FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG6251-RA through 18771 annotations produced 1 hits

Nucleoporin (Nup62):

Annotation Number : CG6251
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034118
Gbrowse : chr2R:12231881-12233333 (+) // 100.0 //
Probeset : 1628161_at
Accessions : protein= NP_611120;, nucleotide= NM_137276;
Pathway : engulfment // inferred from mutant phenotype"
Interpro : 0005643 // nuclear pore // inferred from sequence or structural similarity /// 0005643 // nuclear pore // non-traceable
FlyMine data for FBgn0034118.
BDGP gene expression has embryonic in situ data for CG6251: 16 pix of staining in 14 body parts.
Homophila reports that CG6251 is a close match (3e-39) to human gene IBSN;NUP62;SNDI (NP_714941), a gene associated with Striatonigral degeneration, infantile, 271930 (3).
BioGrid reports that CG6251 interacts with CG6819 CG7375 CG8831 CG9951 .
TRiP has 1 RNAi stocks for FBgn0034118 available for purchase.
VDRC has 3 RNAi stocks for FBgn0034118 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	140 ± 5	4 of 4	0.70	Down
Head	92 ± 5	4 of 4	0.40	Down
Eye	171 ± 2	4 of 4	0.83	Down
Thoracicoabdominal ganglion	124 ± 9	4 of 4	0.60	Down
Salivary gland	81 ± 5	4 of 4	0.40	Down
Crop	97 ± 1	4 of 4	0.50	Down
Midgut	60 ± 7	4 of 4	0.30	Down
Tubule	36 ± 2	4 of 4	0.20	Down
Hindgut	63 ± 3	4 of 4	0.30	Down
Heart	73 ± 6	4 of 4	0.36	Down
Fat body	48 ± 8	4 of 4	0.24	Down
Ovary	394 ± 5	4 of 4	1.90	Up
Testis	264 ± 12	4 of 4	1.30	Up
Male accessory glands	127 ± 7	4 of 4	0.60	Down
Virgin spermatheca	61 ± 2	4 of 4	0.30	Down
Mated spermatheca	73 ± 4	4 of 4	0.36	Down
Adult carcass	58 ± 4	4 of 4	0.30	Down
Larval CNS	345 ± 10	4 of 4	1.68	Up
Larval Salivary gland	132 ± 10	4 of 4	0.64	Down
Larval midgut	35 ± 2	4 of 4	0.17	Down
Larval tubule	68 ± 3	4 of 4	0.30	Down
Larval hindgut	94 ± 4	4 of 4	0.46	Down
Larval fat body	76 ± 13	4 of 4	0.40	Down
Larval trachea	231 ± 19	4 of 4	1.12	None
Larval carcass	76 ± 6	4 of 4	0.37	Down
S2 cells (growing)	217 ± 3	4 of 4	1.06	None
Whole fly	206 ± 7	4 of 4

Looking for CG6251-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720