FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG6258-RA through 18771 annotations produced 1 hits

"DNA replication factor ( 38k subunit"):

Annotation Number : CG6258
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : full length
Gbrowse : chr2L:11128929-11130645 (-) // 100.0 //
Probeset : 1634081_at
Accessions : protein= , nucleotide= NP_609494;
Pathway : 0006260 // DNA replication // inferred from electronic annotation
Interpro : 0005634 // nucleus // inferred from electronic annotation /// 0005663 // DNA replication factor C complex // inferred fr
FlyMine data for full length.
BioGrid reports that CG6258 interacts with CG33122 .

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	79 ± 2	4 of 4	0.20	Down
Head	57 ± 1	4 of 4	0.20	Down
Eye	72 ± 1	4 of 4	0.21	Down
Thoracicoabdominal ganglion	87 ± 2	4 of 4	0.30	Down
Salivary gland	64 ± 6	0 of 4	0.19	Down
Crop	74 ± 5	4 of 4	0.20	Down
Midgut	65 ± 3	2 of 4	0.20	Down
Tubule	83 ± 11	4 of 4	0.20	Down
Hindgut	70 ± 5	4 of 4	0.20	Down
Heart	58 ± 4	4 of 4	0.17	Down
Fat body	71 ± 9	4 of 4	0.21	Down
Ovary	741 ± 16	4 of 4	2.10	Up
Testis	56 ± 3	4 of 4	0.20	Down
Male accessory glands	119 ± 6	4 of 4	0.30	Down
Virgin spermatheca	75 ± 7	4 of 4	0.22	Down
Mated spermatheca	109 ± 11	4 of 4	0.31	Down
Adult carcass	59 ± 8	3 of 4	0.20	Down
Larval CNS	444 ± 22	4 of 4	1.28	Up
Larval Salivary gland	225 ± 14	4 of 4	0.65	Down
Larval midgut	61 ± 3	4 of 4	0.18	Down
Larval tubule	76 ± 1	4 of 4	0.20	Down
Larval hindgut	118 ± 6	4 of 4	0.34	Down
Larval fat body	63 ± 4	3 of 4	0.20	Down
Larval trachea	255 ± 25	4 of 4	0.74	Down
Larval carcass	144 ± 11	4 of 4	0.41	Down
S2 cells (growing)	226 ± 7	4 of 4	0.65	Down
Whole fly	347 ± 19	4 of 4

Looking for CG6258-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720