FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG6269-RA through 18771 annotations produced 1 hits

Paired HomeoDomain 1 (unc-4):

Annotation Number : CG6269
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0024184
Gbrowse : chrX:17663415-17674916 (+) // 100.0 //
Probeset : 1636472_at
Accessions : protein= NP_573242;, nucleotide= NM_133014;
Pathway : DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred fr
Interpro : 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic
FlyMine data for FBgn0024184.
Homophila reports that CG6269 is a close match (5e-12) to human gene KTCN;PPCD;PPD;RINX;VSX1 (NP_055403), a gene associated with Corneal dystrophy, hereditary polymorphous posterior, 122000 (3);Craniofacial anomalies, empty sella turcica, corneal endothelial changes, and abnormal retinal and auditory bipolar cells (3);Keratoconus, 148300 (3).
BioGrid reports that CG6269 interacts with CG8384 .
TRiP has 1 RNAi stocks for FBgn0024184 available for purchase.
VDRC has 3 RNAi stocks for FBgn0024184 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	3 ± 1	0 of 4	1.30	None
Head	5 ± 0	0 of 4	2.20	None
Eye	2 ± 1	0 of 4	1.09	None
Thoracicoabdominal ganglion	3 ± 1	0 of 4	1.20	None
Salivary gland	9 ± 3	0 of 4	3.75	None
Crop	4 ± 1	0 of 4	1.60	None
Midgut	3 ± 0	0 of 4	1.20	None
Tubule	1 ± 0	0 of 4	0.40	Down
Hindgut	2 ± 1	0 of 4	1.00	None
Heart	0 ± 0	0 of 4	0.26	None
Fat body	3 ± 1	0 of 4	1.25	None
Ovary	1 ± 0	0 of 4	0.50	None
Testis	0 ± 0	0 of 4	0.20	None
Male accessory glands	5 ± 2	0 of 4	2.00	None
Virgin spermatheca	3 ± 2	1 of 4	1.29	None
Mated spermatheca	3 ± 2	0 of 4	1.44	None
Adult carcass	4 ± 1	0 of 4	1.90	None
Larval CNS	3 ± 1	1 of 4	1.21	None
Larval Salivary gland	1 ± 0	0 of 4	0.73	None
Larval midgut	2 ± 1	0 of 4	0.84	None
Larval tubule	2 ± 0	0 of 4	1.00	None
Larval hindgut	4 ± 1	0 of 4	1.56	None
Larval fat body	3 ± 2	0 of 4	1.30	None
Larval trachea	1 ± 1	0 of 4	0.46	None
Larval carcass	1 ± 0	0 of 4	0.65	None
S2 cells (growing)	0 ± 0	0 of 4	0.35	None
Whole fly	2 ± 1	0 of 4

Looking for CG6269-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720