FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG6371-RA through 18771 annotations produced 1 hits

pyrokinin (hug):

Annotation Number : CG6371
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0028374
Gbrowse : chr3R:8351909-8354798 (+) // 100.0 //
Probeset : 1638436_at
Accessions : protein= NP_524329;, nucleotide= NM_079605;
Pathway : chitin-based cuticle // inferred from mutant phenotype /// 0030536 // larval feeding behavior // inferred from mutant p
Interpro : 0005576 // extracellular region // inferred from electronic annotation /// 0005576 // extracellular region // non-tracea
FlyMine data for FBgn0028374.
BDGP gene expression has embryonic in situ data for hug: 4 pix of staining in 1 body parts.
TRiP has 1 RNAi stocks for FBgn0028374 available for purchase.
VDRC has 3 RNAi stocks for FBgn0028374 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1104 ± 30	4 of 4	49.00	Up
Head	289 ± 21	4 of 4	12.80	Up
Eye	6 ± 1	0 of 4	0.28	Down
Thoracicoabdominal ganglion	5 ± 1	0 of 4	0.30	Down
Salivary gland	15 ± 2	0 of 4	0.66	Down
Crop	3 ± 1	0 of 4	0.10	Down
Midgut	4 ± 1	0 of 4	0.20	Down
Tubule	2 ± 0	0 of 4	0.10	Down
Hindgut	4 ± 1	0 of 4	0.20	Down
Heart	3 ± 1	0 of 4	0.18	Down
Fat body	2 ± 1	0 of 4	0.09	Down
Ovary	3 ± 1	0 of 4	0.20	Down
Testis	1 ± 0	0 of 4	0.10	Down
Male accessory glands	3 ± 2	0 of 4	0.20	Down
Virgin spermatheca	4 ± 2	0 of 4	0.20	Down
Mated spermatheca	4 ± 1	0 of 4	0.20	Down
Adult carcass	4 ± 1	0 of 4	0.20	Down
Larval CNS	335 ± 37	4 of 4	14.89	Up
Larval Salivary gland	5 ± 0	0 of 4	0.25	Down
Larval midgut	6 ± 0	0 of 4	0.27	Down
Larval tubule	2 ± 1	0 of 4	0.10	Down
Larval hindgut	4 ± 0	0 of 4	0.19	Down
Larval fat body	5 ± 1	0 of 4	0.30	Down
Larval trachea	2 ± 2	0 of 4	0.12	Down
Larval carcass	2 ± 0	0 of 4	0.12	Down
S2 cells (growing)	2 ± 0	0 of 4	0.10	Down
Whole fly	22 ± 1	4 of 4

Looking for CG6371-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720