FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG6401-RA through 18771 annotations produced 1 hits

(CG6401):

Annotation Number : CG6401
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034270
Gbrowse : chr2R:13625356-13627162 (-) // 100.0 //
Probeset : 1635762_at
Accessions : protein= NP_611257;, nucleotide= NM_137413;
Pathway : 0030176 // integral to endoplasmic reticulum membrane // inferred from sequence or structural similarity
Interpro : "0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity
FlyMine data for FBgn0034270.
BDGP gene expression has embryonic in situ data for CG6401: 4 pix of staining in 1 body parts.
Homophila reports that CG6401 is a close match (3e-11) to human gene PIGA (NP_065206), a gene associated with Paroxysmal nocturnal hemoglobinuria (3).
VDRC has 2 RNAi stocks for FBgn0034270 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	49 ± 2	4 of 4	1.30	None
Head	25 ± 3	0 of 4	0.70	Down
Eye	22 ± 2	4 of 4	0.59	Down
Thoracicoabdominal ganglion	51 ± 2	4 of 4	1.30	Up
Salivary gland	28 ± 3	0 of 4	0.74	None
Crop	23 ± 1	1 of 4	0.60	Down
Midgut	31 ± 1	3 of 4	0.80	None
Tubule	14 ± 1	0 of 4	0.40	Down
Hindgut	18 ± 1	0 of 4	0.50	Down
Heart	15 ± 2	3 of 4	0.41	Down
Fat body	29 ± 3	0 of 4	0.78	None
Ovary	80 ± 5	4 of 4	2.10	Up
Testis	37 ± 1	4 of 4	1.00	None
Male accessory glands	30 ± 3	1 of 4	0.80	None
Virgin spermatheca	28 ± 1	3 of 4	0.75	Down
Mated spermatheca	35 ± 0	2 of 4	0.92	None
Adult carcass	25 ± 4	0 of 4	0.70	None
Larval CNS	47 ± 1	4 of 4	1.23	Up
Larval Salivary gland	58 ± 2	4 of 4	1.53	Up
Larval midgut	42 ± 2	4 of 4	1.11	None
Larval tubule	40 ± 2	4 of 4	1.10	None
Larval hindgut	27 ± 1	3 of 4	0.70	Down
Larval fat body	65 ± 3	4 of 4	1.70	Up
Larval trachea	19 ± 1	4 of 4	0.50	Down
Larval carcass	25 ± 2	0 of 4	0.68	Down
S2 cells (growing)	56 ± 2	4 of 4	1.48	Up
Whole fly	38 ± 2	4 of 4

Looking for CG6401-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720