Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG6433-RA through 18771 annotations produced 1 hits



chr2L:17486805-17497203 (-) // 100.0 // (quail):

Annotation Number : CG6433
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : full length
Gbrowse : March 2006 (FlyBase/BDGP 5.3)
Probeset : 1634526_a_at
Accessions : protein= , nucleotide= NP_724060; /// NP_724061;
Pathway : "0007010 // cytoskeleton organization // inferred from electronic annotation /// 0007015 // actin filament organization
Interpro : nurse cell to oocyte // non-traceable author statement /// 0030154 // cell differentiation // inferred from electronic
FlyMine data for full length.
Homophila reports that CG6433 is a close match (2e-48) to human gene GSN (NP_937895), a gene associated with Amyloidosis, Finnish type, 105120 (3).
BioGrid reports that CG6433 interacts with CG3510 CG32858 CG32858 .


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain0 ± 00 of 4 0.00Down
Head4 ± 00 of 4 0.00Down
Eye4 ± 00 of 4 0.02Down
Thoracicoabdominal ganglion2 ± 10 of 4 0.00Down
Salivary gland91 ± 54 of 4 0.42Down
Crop327 ± 94 of 4 1.50Up
Midgut5 ± 10 of 4 0.00Down
Tubule4 ± 10 of 4 0.00Down
Hindgut59 ± 14 of 4 0.30Down
Heart1 ± 00 of 4 0.00Down
Fat body5 ± 20 of 4 0.02Down
Ovary521 ± 44 of 4 2.40Up
Testis688 ± 234 of 4 3.10Up
Male accessory glands6 ± 30 of 4 0.00Down
Virgin spermatheca9 ± 10 of 4 0.04Down
Mated spermatheca19 ± 31 of 4 0.09Down
Adult carcass6 ± 30 of 4 0.00Down
Larval CNS1 ± 10 of 4 0.01Down
Larval Salivary gland1 ± 00 of 4 0.01Down
Larval midgut84 ± 84 of 4 0.38Down
Larval tubule2 ± 00 of 4 0.00Down
Larval hindgut1 ± 00 of 4 0.01Down
Larval fat body55 ± 363 of 4 0.30Down
Larval trachea10 ± 62 of 4 0.05Down
Larval carcass1 ± 00 of 4 0.01Down
S2 cells (growing)0 ± 00 of 4 0.00Down
Whole fly220 ± 74 of 4

Looking for CG6433-RA. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime