Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG6513-RA through 18771 annotations produced 1 hits



dendos (endos):

Annotation Number : CG6513
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0061515
Gbrowse : chr3L:14022678-14024804 (-) // 100.0 //
Probeset : 1636822_s_at
Accessions : protein= NP_648684; /// NP_729949;, nucleotide= NM_140427; /// NM_168572;
Interpro : 0005515 // protein binding // inferred from physical interaction /// 0017098 // sulfonylurea receptor binding // inferre
FlyMine data for FBgn0061515.
BioGrid reports that CG6513 interacts with CG9014 CG7168 .
VDRC has 2 RNAi stocks for FBgn0061515 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain558 ± 234 of 4 0.90None
Head492 ± 294 of 4 0.80Down
Eye970 ± 224 of 4 1.61Up
Thoracicoabdominal ganglion520 ± 154 of 4 0.90Down
Salivary gland340 ± 84 of 4 0.56Down
Crop438 ± 114 of 4 0.70Down
Midgut175 ± 34 of 4 0.30Down
Tubule1288 ± 904 of 4 2.10Up
Hindgut1364 ± 194 of 4 2.30Up
Heart573 ± 214 of 4 0.95None
Fat body393 ± 374 of 4 0.65Down
Ovary831 ± 154 of 4 1.40Up
Testis1154 ± 464 of 4 1.90Up
Male accessory glands216 ± 154 of 4 0.40Down
Virgin spermatheca495 ± 84 of 4 0.82Down
Mated spermatheca435 ± 244 of 4 0.72Down
Adult carcass331 ± 144 of 4 0.50Down
Larval CNS991 ± 564 of 4 1.64Up
Larval Salivary gland358 ± 124 of 4 0.60Down
Larval midgut229 ± 234 of 4 0.38Down
Larval tubule737 ± 304 of 4 1.20Up
Larval hindgut651 ± 134 of 4 1.08None
Larval fat body584 ± 244 of 4 1.00None
Larval trachea639 ± 784 of 4 1.06None
Larval carcass534 ± 204 of 4 0.89Down
S2 cells (growing)840 ± 64 of 4 1.39Up
Whole fly602 ± 154 of 4

Looking for CG6513-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime