FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG6525-RA through 18771 annotations produced 1 hits

SNFs Protein Partner (pps):

Annotation Number : CG6525
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0082831
Gbrowse : chr3R:8239878-8246629 (+) // 100.0 //
Probeset : 1630626_at
Accessions : protein= NP_650193;, nucleotide= NM_141936;
Pathway : 0000790 // nuclear chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structura
Interpro : 0003700 // sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarit
FlyMine data for FBgn0082831.
TRiP has 2 RNAi stocks for FBgn0082831 available for purchase.
VDRC has 1 RNAi stocks for FBgn0082831 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	95 ± 5	4 of 4	2.00	Up
Head	43 ± 4	4 of 4	0.90	None
Eye	15 ± 1	4 of 4	0.33	Down
Thoracicoabdominal ganglion	69 ± 3	4 of 4	1.40	Up
Salivary gland	51 ± 6	1 of 4	1.07	None
Crop	34 ± 2	4 of 4	0.70	None
Midgut	37 ± 5	3 of 4	0.80	None
Tubule	13 ± 1	0 of 4	0.30	Down
Hindgut	47 ± 2	4 of 4	1.00	None
Heart	5 ± 0	0 of 4	0.11	Down
Fat body	20 ± 3	1 of 4	0.43	Down
Ovary	76 ± 3	4 of 4	1.60	Up
Testis	51 ± 6	4 of 4	1.10	None
Male accessory glands	53 ± 6	3 of 4	1.10	None
Virgin spermatheca	4 ± 1	0 of 4	0.08	Down
Mated spermatheca	3 ± 1	0 of 4	0.07	Down
Adult carcass	39 ± 6	2 of 4	0.80	None
Larval CNS	105 ± 8	4 of 4	2.18	Up
Larval Salivary gland	69 ± 5	4 of 4	1.44	Up
Larval midgut	25 ± 6	2 of 4	0.53	Down
Larval tubule	58 ± 4	4 of 4	1.20	None
Larval hindgut	41 ± 2	4 of 4	0.85	None
Larval fat body	21 ± 3	1 of 4	0.50	Down
Larval trachea	13 ± 1	3 of 4	0.28	Down
Larval carcass	43 ± 2	4 of 4	0.90	None
S2 cells (growing)	85 ± 2	4 of 4	1.76	Up
Whole fly	48 ± 5	4 of 4

Looking for CG6525-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720