FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG6534-RA through 18771 annotations produced 1 hits

slouch (slou):

Annotation Number : CG6534
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0002941
Gbrowse : chr3R:17374374-17383004 (-) // 100.0 //
Probeset : 1629368_at
Accessions : protein= NP_476657;, nucleotide= NM_057309;
Pathway : DNA-dependent // inferred from sequence or structural similarity /// 0006355 // regulation of transcription
Interpro : DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred fr
FlyMine data for FBgn0002941.
Homophila reports that CG6534 is a close match (9e-11) to human gene H6;HMX1 (NP_061815), a gene associated with Oculoauricular syndrome, 612109 (3).
BioGrid reports that CG6534 interacts with CG8280 CG9572 .
TRiP has 1 RNAi stocks for FBgn0002941 available for purchase.
VDRC has 3 RNAi stocks for FBgn0002941 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	55 ± 3	4 of 4	6.90	Up
Head	20 ± 2	1 of 4	2.60	Up
Eye	3 ± 0	0 of 4	0.39	Down
Thoracicoabdominal ganglion	87 ± 3	4 of 4	10.80	Up
Salivary gland	3 ± 1	0 of 4	0.45	None
Crop	1 ± 0	0 of 4	0.20	Down
Midgut	0 ± 0	0 of 4	0.10	Down
Tubule	0 ± 0	0 of 4	0.10	Down
Hindgut	0 ± 0	0 of 4	0.10	Down
Heart	1 ± 1	0 of 4	0.23	Down
Fat body	2 ± 1	0 of 4	0.32	Down
Ovary	1 ± 0	0 of 4	0.10	Down
Testis	1 ± 0	0 of 4	0.20	Down
Male accessory glands	1 ± 0	0 of 4	0.20	Down
Virgin spermatheca	2 ± 1	0 of 4	0.32	None
Mated spermatheca	1 ± 0	0 of 4	0.16	Down
Adult carcass	16 ± 5	0 of 4	2.00	None
Larval CNS	91 ± 6	4 of 4	11.36	Up
Larval Salivary gland	0 ± 0	0 of 4	0.11	Down
Larval midgut	0 ± 0	0 of 4	0.11	Down
Larval tubule	0 ± 0	0 of 4	0.10	Down
Larval hindgut	1 ± 0	0 of 4	0.13	Down
Larval fat body	0 ± 0	0 of 4	0.10	Down
Larval trachea	1 ± 0	0 of 4	0.14	Down
Larval carcass	39 ± 5	4 of 4	4.89	Up
S2 cells (growing)	0 ± 0	0 of 4	0.08	Down
Whole fly	8 ± 1	0 of 4

Looking for CG6534-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720