FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG6549-RC through 18771 annotations produced 1 hits

Drosophila Cog5 (fws):

Annotation Number : CG6549
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0024689
Gbrowse : chr2L:17478440-17481067 (-) // 100.0 //
Probeset : 1626224_s_at
Accessions : protein= NP_523590; /// NP_724058;, nucleotide= NM_078866; /// NM_165221;
Pathway : 0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electro
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0024689.
BDGP gene expression has embryonic in situ data for fws: 10 pix of staining in 3 body parts.
VDRC has 2 RNAi stocks for FBgn0024689 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	119 ± 3	4 of 4	1.20	Up
Head	90 ± 3	4 of 4	0.90	None
Eye	90 ± 6	4 of 4	0.94	None
Thoracicoabdominal ganglion	137 ± 2	4 of 4	1.40	Up
Salivary gland	546 ± 22	4 of 4	5.66	Up
Crop	134 ± 5	4 of 4	1.40	Up
Midgut	103 ± 1	4 of 4	1.10	None
Tubule	102 ± 5	4 of 4	1.10	None
Hindgut	108 ± 4	4 of 4	1.10	None
Heart	67 ± 1	4 of 4	0.70	Down
Fat body	97 ± 16	4 of 4	1.01	None
Ovary	198 ± 4	4 of 4	2.10	Up
Testis	58 ± 2	4 of 4	0.60	Down
Male accessory glands	398 ± 9	4 of 4	4.10	Up
Virgin spermatheca	88 ± 4	4 of 4	0.92	None
Mated spermatheca	104 ± 6	4 of 4	1.08	None
Adult carcass	83 ± 4	3 of 4	0.90	None
Larval CNS	111 ± 2	4 of 4	1.16	None
Larval Salivary gland	436 ± 13	4 of 4	4.52	Up
Larval midgut	92 ± 6	4 of 4	0.95	None
Larval tubule	122 ± 2	4 of 4	1.30	Up
Larval hindgut	109 ± 6	4 of 4	1.13	None
Larval fat body	109 ± 9	4 of 4	1.10	None
Larval trachea	97 ± 7	4 of 4	1.01	None
Larval carcass	87 ± 2	4 of 4	0.91	None
S2 cells (growing)	210 ± 6	4 of 4	2.18	Up
Whole fly	96 ± 5	4 of 4

Looking for CG6549-RC. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720