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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG6575-RA through 18771 annotations produced 1 hits



Gliolectin (glec):

Annotation Number : CG6575
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0015229
Gbrowse : chr3R:17676626-17681984 (-) // 100.0 //
Probeset : 1628743_at
Accessions : protein= NP_524443;, nucleotide= NM_079719;
Pathway : 0005624 // membrane fraction // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay
Interpro : 0005515 // protein binding // inferred from physical interaction /// 0005529 // sugar binding // inferred from electroni
FlyMine data for FBgn0015229.
BioGrid reports that CG6575 interacts with CG7001 CG3978 .
VDRC has 2 RNAi stocks for FBgn0015229 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain440 ± 144 of 4 2.00Up
Head204 ± 174 of 4 0.90None
Eye250 ± 134 of 4 1.16None
Thoracicoabdominal ganglion228 ± 214 of 4 1.10None
Salivary gland125 ± 264 of 4 0.58Down
Crop147 ± 84 of 4 0.70Down
Midgut105 ± 54 of 4 0.50Down
Tubule29 ± 33 of 4 0.10Down
Hindgut119 ± 14 of 4 0.60Down
Heart127 ± 164 of 4 0.59Down
Fat body124 ± 194 of 4 0.57Down
Ovary532 ± 154 of 4 2.50Up
Testis28 ± 14 of 4 0.10Down
Male accessory glands162 ± 54 of 4 0.70Down
Virgin spermatheca26 ± 24 of 4 0.12Down
Mated spermatheca37 ± 54 of 4 0.17Down
Adult carcass128 ± 134 of 4 0.60Down
Larval CNS317 ± 394 of 4 1.47Up
Larval Salivary gland42 ± 44 of 4 0.20Down
Larval midgut158 ± 264 of 4 0.73None
Larval tubule168 ± 164 of 4 0.80None
Larval hindgut82 ± 74 of 4 0.38Down
Larval fat body251 ± 264 of 4 1.20None
Larval trachea45 ± 24 of 4 0.21Down
Larval carcass116 ± 254 of 4 0.54Down
S2 cells (growing)47 ± 24 of 4 0.22Down
Whole fly216 ± 54 of 4

Looking for CG6575-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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