FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG6593-RA through 18771 annotations produced 1 hits

Protein phosphatase 1alpha at 96A (Pp1alpha-96A):

Annotation Number : CG6593
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0003134
Gbrowse : chr3R:20343978-20347065 (+) // 100.0 //
Probeset : 1625806_at
Accessions : protein= NP_524484;, nucleotide= NM_079760;
Pathway : 0000164 // protein phosphatase type 1 complex // inferred from sequence or structural similarity
Interpro : 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004722 // protein serine/thre
FlyMine data for FBgn0003134.
BDGP gene expression has embryonic in situ data for Pp1alpha-96A: 4 pix of staining in 1 body parts.
BioGrid reports that CG6593 interacts with CG8980 CG8316 CG9170 CG9238 CG9933 CG10574 CG8980 .
TRiP has 1 RNAi stocks for FBgn0003134 available for purchase.
VDRC has 2 RNAi stocks for FBgn0003134 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	238 ± 9	4 of 4	1.00	None
Head	332 ± 2	4 of 4	1.50	Up
Eye	249 ± 4	4 of 4	1.10	None
Thoracicoabdominal ganglion	173 ± 8	4 of 4	0.80	Down
Salivary gland	548 ± 16	4 of 4	2.41	Up
Crop	1060 ± 21	4 of 4	4.70	Up
Midgut	97 ± 3	4 of 4	0.40	Down
Tubule	245 ± 11	4 of 4	1.10	None
Hindgut	520 ± 8	4 of 4	2.30	Up
Heart	463 ± 12	4 of 4	2.04	Up
Fat body	1109 ± 115	4 of 4	4.87	Up
Ovary	292 ± 5	4 of 4	1.30	Up
Testis	120 ± 6	4 of 4	0.50	Down
Male accessory glands	386 ± 10	4 of 4	1.70	Up
Virgin spermatheca	955 ± 27	4 of 4	4.20	Up
Mated spermatheca	656 ± 56	4 of 4	2.88	Up
Adult carcass	425 ± 29	4 of 4	1.90	Up
Larval CNS	266 ± 29	4 of 4	1.17	None
Larval Salivary gland	499 ± 10	4 of 4	2.19	Up
Larval midgut	82 ± 1	4 of 4	0.36	Down
Larval tubule	215 ± 7	4 of 4	0.90	None
Larval hindgut	227 ± 4	4 of 4	1.00	None
Larval fat body	201 ± 14	4 of 4	0.90	None
Larval trachea	169 ± 20	4 of 4	0.75	Down
Larval carcass	235 ± 15	4 of 4	1.04	None
S2 cells (growing)	325 ± 4	4 of 4	1.43	Up
Whole fly	227 ± 13	4 of 4

Looking for CG6593-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720