FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG6596-RA through 18771 annotations produced 1 hits

CG6596 (CG42269):

Annotation Number : CG6596
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0259164
Gbrowse : chr3L:6059594-6059993 (+) // 100.0 //
Probeset : 1627611_at
Accessions : protein= NP_648018; /// NP_648019;, nucleotide= NM_139761; /// NM_139762; /// NM_139762;
Pathway : 0016021 // integral to membrane // inferred from electronic annotation
Interpro : 0005215 // transporter activity // inferred from electronic annotation /// 0008513 // secondary active organic cation tr
FlyMine data for FBgn0259164.
VDRC has 5 RNAi stocks for FBgn0259164 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	4 ± 1	0 of 4	0.50	None
Head	6 ± 0	0 of 4	0.80	None
Eye	3 ± 1	0 of 4	0.41	Down
Thoracicoabdominal ganglion	6 ± 0	1 of 4	0.80	None
Salivary gland	11 ± 3	0 of 4	1.42	None
Crop	10 ± 1	2 of 4	1.30	None
Midgut	7 ± 2	1 of 4	0.90	None
Tubule	6 ± 1	0 of 4	0.80	None
Hindgut	118 ± 3	4 of 4	14.30	Up
Heart	4 ± 2	1 of 4	0.53	None
Fat body	9 ± 2	0 of 4	1.09	None
Ovary	5 ± 1	1 of 4	0.70	None
Testis	4 ± 0	0 of 4	0.60	None
Male accessory glands	15 ± 1	2 of 4	1.90	Up
Virgin spermatheca	7 ± 1	0 of 4	0.87	None
Mated spermatheca	9 ± 1	1 of 4	1.09	None
Adult carcass	15 ± 2	0 of 4	1.80	Up
Larval CNS	5 ± 0	0 of 4	0.63	None
Larval Salivary gland	6 ± 1	0 of 4	0.83	None
Larval midgut	3 ± 1	0 of 4	0.38	None
Larval tubule	2 ± 0	0 of 4	0.30	Down
Larval hindgut	10 ± 1	1 of 4	1.25	None
Larval fat body	1 ± 0	0 of 4	0.20	Down
Larval trachea	3 ± 2	0 of 4	0.47	Down
Larval carcass	24 ± 8	2 of 4	2.97	None
S2 cells (growing)	3 ± 1	0 of 4	0.45	Down
Whole fly	8 ± 1	2 of 4

Looking for CG6596-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720