FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG6608-RB through 18771 annotations produced 1 hits

(CG6608):

Annotation Number : CG6608
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037852
Gbrowse : chr3R:6705286-6707909 (-) // 100.0 //
Probeset : 1641606_s_at
Accessions : protein= NP_650034; /// NP_731527;, nucleotide= NM_141777; /// NM_169372;
Pathway : 0005740 // mitochondrial envelope // inferred from sequence or structural similarity /// 0005743 // mitochondrial inner
Interpro : 0005488 // binding // inferred from electronic annotation /// 0022857 // transmembrane transporter activity // inferred
FlyMine data for FBgn0037852.
BDGP gene expression has embryonic in situ data for CG6608: 16 pix of staining in 12 body parts.
Homophila reports that CG6608 is a close match (5e-12) to human gene SLC25A20;CACT;CAC (NP_000378), a gene associated with Carnitine-acylcarnitine translocase deficiency (3).
BioGrid reports that CG6608 interacts with CG7158 CG7768 CG9282 .
TRiP has 1 RNAi stocks for FBgn0037852 available for purchase.
VDRC has 1 RNAi stocks for FBgn0037852 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	134 ± 2	4 of 4	1.20	None
Head	98 ± 7	4 of 4	0.80	None
Eye	90 ± 4	4 of 4	0.78	Down
Thoracicoabdominal ganglion	120 ± 5	4 of 4	1.00	None
Salivary gland	164 ± 8	4 of 4	1.41	Up
Crop	101 ± 4	4 of 4	0.90	None
Midgut	95 ± 3	4 of 4	0.80	None
Tubule	203 ± 11	4 of 4	1.80	Up
Hindgut	105 ± 1	4 of 4	0.90	None
Heart	150 ± 9	4 of 4	1.29	Up
Fat body	126 ± 12	4 of 4	1.09	None
Ovary	165 ± 2	4 of 4	1.40	Up
Testis	50 ± 1	4 of 4	0.40	Down
Male accessory glands	79 ± 3	4 of 4	0.70	Down
Virgin spermatheca	140 ± 4	4 of 4	1.21	None
Mated spermatheca	141 ± 10	4 of 4	1.22	None
Adult carcass	99 ± 4	4 of 4	0.90	None
Larval CNS	97 ± 5	4 of 4	0.84	None
Larval Salivary gland	104 ± 2	4 of 4	0.90	None
Larval midgut	97 ± 12	4 of 4	0.84	None
Larval tubule	157 ± 6	4 of 4	1.40	Up
Larval hindgut	75 ± 3	4 of 4	0.65	Down
Larval fat body	297 ± 31	4 of 4	2.60	Up
Larval trachea	104 ± 15	4 of 4	0.90	None
Larval carcass	91 ± 18	4 of 4	0.79	None
S2 cells (growing)	161 ± 2	4 of 4	1.39	Up
Whole fly	116 ± 8	4 of 4

Looking for CG6608-RB. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720