FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG6611-RC through 18771 annotations produced 1 hits

Interferon-like protein (ect):

Annotation Number : CG6611
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0000451
Gbrowse : chr3L:10186166-10194934 (-) // 100.0 //
Probeset : 1623922_at
Accessions : protein= NP_524706; /// NP_729596; /// NP_729597;, nucleotide= NM_079967; /// NM_168400; /// NM_168401;
FlyMine data for FBgn0000451.
BDGP gene expression has embryonic in situ data for ect: 16 pix of staining in 8 body parts.
BioGrid reports that CG6611 interacts with CG8364 CG8843 .
VDRC has 2 RNAi stocks for FBgn0000451 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	5 ± 0	2 of 4	0.60	None
Head	6 ± 0	2 of 4	0.70	None
Eye	6 ± 1	2 of 4	0.75	None
Thoracicoabdominal ganglion	4 ± 1	1 of 4	0.60	None
Salivary gland	13 ± 2	2 of 4	1.52	None
Crop	9 ± 0	4 of 4	1.10	None
Midgut	9 ± 1	3 of 4	1.10	None
Tubule	6 ± 0	1 of 4	0.80	Down
Hindgut	33 ± 2	4 of 4	4.00	Up
Heart	6 ± 0	2 of 4	0.76	None
Fat body	15 ± 2	4 of 4	1.76	None
Ovary	5 ± 1	1 of 4	0.60	None
Testis	2 ± 0	1 of 4	0.30	None
Male accessory glands	11 ± 2	3 of 4	1.40	None
Virgin spermatheca	5 ± 1	4 of 4	0.69	None
Mated spermatheca	8 ± 0	4 of 4	0.93	None
Adult carcass	13 ± 3	2 of 4	1.50	None
Larval CNS	6 ± 2	4 of 4	0.78	None
Larval Salivary gland	6 ± 1	1 of 4	0.80	None
Larval midgut	9 ± 0	3 of 4	1.05	None
Larval tubule	5 ± 1	2 of 4	0.60	None
Larval hindgut	11 ± 2	4 of 4	1.33	None
Larval fat body	8 ± 2	2 of 4	0.90	None
Larval trachea	7 ± 0	2 of 4	0.83	None
Larval carcass	12 ± 1	3 of 4	1.51	None
S2 cells (growing)	4 ± 0	2 of 4	0.50	None
Whole fly	8 ± 2	2 of 4

Looking for CG6611-RC. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720