FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG6644-RA through 18771 annotations produced 1 hits

UDP-glycosyltransferase 35a (Ugt35a):

Annotation Number : CG6644
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0026315
Gbrowse : chr3R:6996520-6998386 (-) // 100.0 //
Probeset : 1627662_at
Accessions : protein= NP_524314;, nucleotide= NM_079590;
Interpro : "0008194 // UDP-glycosyltransferase activity // non-traceable author statement /// 0015020 // glucuronosyltransferase ac
FlyMine data for FBgn0026315.
BDGP gene expression has embryonic in situ data for Ugt35a: 6 pix of staining in 2 body parts.
Homophila reports that CG6644 is a close match (3e-49) to human gene GNT1;UGT1;UGT1A1 (NP_000454), a gene associated with Crigler-Najjar syndrome, type I, 218800 (3);Crigler-Najjar syndrome, type II, 606785 (3);Hyperbilirubinemia, familial transcient neonatal, 237900 (3);[Gilbert syndrome], 143500 (3).

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	30 ± 1	4 of 4	0.30	Down
Head	126 ± 10	4 of 4	1.40	Up
Eye	103 ± 11	4 of 4	1.13	None
Thoracicoabdominal ganglion	64 ± 2	4 of 4	0.70	Down
Salivary gland	123 ± 2	4 of 4	1.34	Up
Crop	150 ± 2	4 of 4	1.60	Up
Midgut	736 ± 20	4 of 4	8.00	Up
Tubule	723 ± 24	4 of 4	7.90	Up
Hindgut	401 ± 14	4 of 4	4.40	Up
Heart	92 ± 11	4 of 4	1.00	None
Fat body	32 ± 7	4 of 4	0.36	Down
Ovary	27 ± 2	4 of 4	0.30	Down
Testis	8 ± 1	4 of 4	0.10	Down
Male accessory glands	826 ± 11	4 of 4	9.00	Up
Virgin spermatheca	46 ± 4	4 of 4	0.51	Down
Mated spermatheca	31 ± 3	4 of 4	0.34	Down
Adult carcass	119 ± 3	4 of 4	1.30	Up
Larval CNS	48 ± 19	4 of 4	0.53	Down
Larval Salivary gland	115 ± 13	4 of 4	1.26	None
Larval midgut	977 ± 51	4 of 4	10.62	Up
Larval tubule	252 ± 19	4 of 4	2.70	Up
Larval hindgut	311 ± 17	4 of 4	3.39	Up
Larval fat body	25 ± 4	3 of 4	0.30	Down
Larval trachea	162 ± 46	4 of 4	1.76	None
Larval carcass	284 ± 51	4 of 4	3.10	Up
S2 cells (growing)	396 ± 20	4 of 4	4.31	Up
Whole fly	92 ± 9	4 of 4

Looking for CG6644-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720