FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG6647-RA through 18771 annotations produced 1 hits

Voltage-dependent anion-selective channel (porin):

Annotation Number : CG6647
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0004363
Gbrowse : chr2L:10847226-10850868 (-) // 100.0 //
Probeset : 1622947_s_at
Accessions : protein= NP_001033899; /// NP_476813; /// NP_599110;, nucleotide= NM_001038810; /// NM_057465; /// NM_134283;
Pathway : 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred
Interpro : 0008308 // voltage-gated anion channel activity // inferred from direct assay /// 0008308 // voltage-gated anion channel
FlyMine data for FBgn0004363.
BDGP gene expression has embryonic in situ data for porin: 15 pix of staining in 29 body parts.
TRiP has 1 RNAi stocks for FBgn0004363 available for purchase.
VDRC has 1 RNAi stocks for FBgn0004363 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	2424 ± 40	4 of 4	1.30	Up
Head	2246 ± 82	4 of 4	1.20	Up
Eye	2716 ± 53	4 of 4	1.44	Up
Thoracicoabdominal ganglion	3065 ± 63	4 of 4	1.60	Up
Salivary gland	1501 ± 56	4 of 4	0.80	Down
Crop	1893 ± 105	4 of 4	1.00	None
Midgut	2225 ± 28	4 of 4	1.20	Up
Tubule	2938 ± 59	4 of 4	1.60	Up
Hindgut	3131 ± 145	4 of 4	1.70	Up
Heart	2350 ± 78	4 of 4	1.25	Up
Fat body	2837 ± 206	4 of 4	1.50	Up
Ovary	2039 ± 28	4 of 4	1.10	None
Testis	796 ± 39	4 of 4	0.40	Down
Male accessory glands	1458 ± 24	4 of 4	0.80	Down
Virgin spermatheca	3179 ± 63	4 of 4	1.68	Up
Mated spermatheca	3029 ± 73	4 of 4	1.60	Up
Adult carcass	2626 ± 67	4 of 4	1.40	Up
Larval CNS	2252 ± 104	4 of 4	1.19	Up
Larval Salivary gland	1534 ± 66	4 of 4	0.81	Down
Larval midgut	1528 ± 71	4 of 4	0.81	Down
Larval tubule	2662 ± 199	4 of 4	1.40	Up
Larval hindgut	3463 ± 45	4 of 4	1.83	Up
Larval fat body	945 ± 84	4 of 4	0.50	Down
Larval trachea	1657 ± 147	4 of 4	0.88	None
Larval carcass	2248 ± 258	4 of 4	1.19	None
S2 cells (growing)	1193 ± 19	4 of 4	0.63	Down
Whole fly	1887 ± 88	4 of 4

Looking for CG6647-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720