FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG6686-RA through 18771 annotations produced 1 hits

(CG6686):

Annotation Number : CG6686
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032388
Gbrowse : chr2L:11984318-11988035 (-) // 100.0 //
Probeset : 1640134_a_at
Accessions : protein= NP_609529; /// NP_723700; /// NP_723701;, nucleotide= NM_135685; /// NM_164977; /// NM_164978;
Pathway : via spliceosome // inferred by curator"
Interpro : 0071011 // precatalytic spliceosome // inferred from direct assay
FlyMine data for FBgn0032388.
BioGrid reports that CG6686 interacts with CG8319 CG7885 .
TRiP has 1 RNAi stocks for FBgn0032388 available for purchase.
VDRC has 3 RNAi stocks for FBgn0032388 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	312 ± 5	4 of 4	1.90	Up
Head	145 ± 7	4 of 4	0.90	None
Eye	112 ± 6	4 of 4	0.68	Down
Thoracicoabdominal ganglion	286 ± 4	4 of 4	1.70	Up
Salivary gland	167 ± 9	4 of 4	1.01	None
Crop	209 ± 4	4 of 4	1.30	Up
Midgut	147 ± 4	4 of 4	0.90	Down
Tubule	232 ± 11	4 of 4	1.40	Up
Hindgut	154 ± 7	4 of 4	0.90	None
Heart	124 ± 4	4 of 4	0.76	Down
Fat body	151 ± 15	4 of 4	0.92	None
Ovary	282 ± 5	4 of 4	1.70	Up
Testis	197 ± 9	4 of 4	1.20	Up
Male accessory glands	258 ± 15	4 of 4	1.60	Up
Virgin spermatheca	214 ± 6	4 of 4	1.30	Up
Mated spermatheca	271 ± 16	4 of 4	1.65	Up
Adult carcass	152 ± 5	4 of 4	0.90	None
Larval CNS	575 ± 46	4 of 4	3.49	Up
Larval Salivary gland	289 ± 3	4 of 4	1.75	Up
Larval midgut	116 ± 2	4 of 4	0.71	Down
Larval tubule	173 ± 2	4 of 4	1.00	None
Larval hindgut	179 ± 3	4 of 4	1.09	None
Larval fat body	140 ± 11	4 of 4	0.90	None
Larval trachea	296 ± 14	4 of 4	1.80	Up
Larval carcass	234 ± 7	4 of 4	1.42	Up
S2 cells (growing)	552 ± 13	4 of 4	3.35	Up
Whole fly	165 ± 5	4 of 4

Looking for CG6686-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720