FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG6715-RA through 18771 annotations produced 1 hits

KP78a /// KP78b (KP78a /// KP78b):

Annotation Number : CG6715
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0026063 /// FBgn0026064
Gbrowse : chr3R:7174249-7176367 (-) // 100.0 //
Probeset : 1636876_at
Accessions : protein= NP_001163587; /// NP_650065; /// NP_650066;, nucleotide= NM_001170116; /// NM_141808; /// NM_141809;
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred
FlyMine data for FBgn0026063 /// FBgn0026064.
Homophila reports that CG6715 is a close match (1e-11) to human gene ANKK1 (NP_848605), a gene associated with Dopamine receptor D2, reduced brain density of (3).

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1 ± 0	0 of 4	0.60	None
Head	1 ± 0	0 of 4	0.60	None
Eye	0 ± 0	0 of 4	0.25	Down
Thoracicoabdominal ganglion	2 ± 1	0 of 4	1.00	None
Salivary gland	5 ± 3	0 of 4	2.10	None
Crop	4 ± 1	0 of 4	1.60	None
Midgut	8 ± 2	0 of 4	3.00	None
Tubule	2 ± 0	0 of 4	1.00	None
Hindgut	1 ± 0	0 of 4	0.60	None
Heart	1 ± 0	0 of 4	0.51	None
Fat body	3 ± 1	0 of 4	1.23	None
Ovary	1 ± 0	0 of 4	0.60	None
Testis	3 ± 0	0 of 4	1.30	None
Male accessory glands	3 ± 1	0 of 4	1.30	None
Virgin spermatheca	4 ± 1	0 of 4	1.52	None
Mated spermatheca	4 ± 1	0 of 4	1.69	None
Adult carcass	6 ± 1	0 of 4	2.40	None
Larval CNS	8 ± 1	4 of 4	3.27	Up
Larval Salivary gland	10 ± 2	1 of 4	3.72	None
Larval midgut	9 ± 2	0 of 4	3.28	None
Larval tubule	1 ± 0	0 of 4	0.60	None
Larval hindgut	2 ± 0	0 of 4	1.03	None
Larval fat body	6 ± 1	0 of 4	2.20	Up
Larval trachea	1 ± 0	0 of 4	0.57	None
Larval carcass	1 ± 0	0 of 4	0.59	None
S2 cells (growing)	10 ± 0	3 of 4	3.89	Up
Whole fly	2 ± 0	0 of 4

Looking for CG6715-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720