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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG6718-RA through 18771 annotations produced 1 hits



CG6718 (iPLA2-VIA):

Annotation Number : CG6718
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036053
Gbrowse : chr3L:9853316-9857459 (-) // 100.0 //
Probeset : 1636791_s_at
Accessions : protein= NP_648366; /// NP_729565; /// NP_729566; /// NP_729567;, nucleotide= NM_140109; /// NM_168383; /// NM_168384; /// NM_168385;
Pathway : 0005829 // cytosol // inferred from sequence or structural similarity
Interpro : 0004623 // phospholipase A2 activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferre
FlyMine data for FBgn0036053.
BDGP gene expression has embryonic in situ data for CG6718: 4 pix of staining in 1 body parts.
Homophila reports that CG6718 is a close match (3e-12) to human gene ANKK1 (NP_848605), a gene associated with Dopamine receptor D2, reduced brain density of (3).
BioGrid reports that CG6718 interacts with CG8235 .
TRiP has 1 RNAi stocks for FBgn0036053 available for purchase.
VDRC has 1 RNAi stocks for FBgn0036053 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain265 ± 44 of 4 1.10Up
Head277 ± 34 of 4 1.10Up
Eye328 ± 114 of 4 1.33Up
Thoracicoabdominal ganglion261 ± 34 of 4 1.10None
Salivary gland482 ± 174 of 4 1.96Up
Crop365 ± 34 of 4 1.50Up
Midgut180 ± 144 of 4 0.70Down
Tubule262 ± 74 of 4 1.10None
Hindgut236 ± 44 of 4 1.00None
Heart362 ± 214 of 4 1.47Up
Fat body539 ± 454 of 4 2.19Up
Ovary401 ± 64 of 4 1.60Up
Testis106 ± 64 of 4 0.40Down
Male accessory glands478 ± 174 of 4 1.90Up
Virgin spermatheca636 ± 374 of 4 2.58Up
Mated spermatheca463 ± 144 of 4 1.88Up
Adult carcass418 ± 124 of 4 1.70Up
Larval CNS276 ± 134 of 4 1.12Up
Larval Salivary gland267 ± 44 of 4 1.08Up
Larval midgut175 ± 74 of 4 0.71Down
Larval tubule285 ± 84 of 4 1.20Up
Larval hindgut183 ± 114 of 4 0.74Down
Larval fat body221 ± 74 of 4 0.90Down
Larval trachea180 ± 84 of 4 0.73Down
Larval carcass209 ± 84 of 4 0.85Down
S2 cells (growing)1394 ± 274 of 4 5.66Up
Whole fly246 ± 54 of 4

Looking for CG6718-RA. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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