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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG6736-RA through 18771 annotations produced 1 hits



Drosophila insulin-like peptide 4 (Ilp4):

Annotation Number : CG6736
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0044049
Gbrowse : chr3L:9796494-9797378 (-) // 99.52 //
Probeset : 1630266_at
Accessions : protein= NP_648361;, nucleotide= NM_140104;
Pathway : 0005576 // extracellular region // inferred from sequence or structural similarity /// 0005576 // extracellular region /
Interpro : 0005158 // insulin receptor binding // inferred from sequence or structural similarity /// 0005179 // hormone activity /
FlyMine data for FBgn0044049.
TRiP has 2 RNAi stocks for FBgn0044049 available for purchase.
VDRC has 2 RNAi stocks for FBgn0044049 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain0 ± 00 of 4 0.20None
Head1 ± 00 of 4 0.30None
Eye1 ± 00 of 4 0.33None
Thoracicoabdominal ganglion1 ± 00 of 4 0.20None
Salivary gland13 ± 10 of 4 2.73None
Crop4 ± 10 of 4 1.00None
Midgut1 ± 00 of 4 0.20None
Tubule1 ± 00 of 4 0.30Down
Hindgut1 ± 00 of 4 0.30None
Heart4 ± 20 of 4 0.90None
Fat body4 ± 20 of 4 0.90None
Ovary0 ± 00 of 4 0.20None
Testis1 ± 00 of 4 0.30None
Male accessory glands3 ± 10 of 4 0.70None
Virgin spermatheca7 ± 20 of 4 1.51None
Mated spermatheca4 ± 10 of 4 0.81None
Adult carcass1 ± 00 of 4 0.30None
Larval CNS1 ± 10 of 4 0.37None
Larval Salivary gland4 ± 10 of 4 0.85None
Larval midgut2 ± 00 of 4 0.50None
Larval tubule1 ± 00 of 4 0.20None
Larval hindgut1 ± 00 of 4 0.22None
Larval fat body1 ± 00 of 4 0.30None
Larval trachea3 ± 10 of 4 0.64None
Larval carcass3 ± 20 of 4 0.73None
S2 cells (growing)1 ± 00 of 4 0.21None
Whole fly5 ± 30 of 4

Looking for CG6736-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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