FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG6742-RA through 18771 annotations produced 1 hits

centaurin beta 1A (cenB1A):

Annotation Number : CG6742
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039056
Gbrowse : chr3R:18944124-18949940 (+) // 100.0 //
Probeset : 1638770_a_at
Accessions : protein= NP_001163696; /// NP_524458; /// NP_732826;, nucleotide= NM_001170225; /// NM_079734; /// NM_170049;
Pathway : engulfment // inferred from mutant phenotype /// 0008152 // metabolic process // inferred from electronic annotation //
FlyMine data for FBgn0039056.
BDGP gene expression has embryonic in situ data for cenB1A: 31 pix of staining in 13 body parts.
Homophila reports that CG6742 is a close match (4e-16) to human gene MRX60;OPHN1 (NP_002538), a gene associated with Mental retardation, X-linked, with cerebellar hypoplasia and distinctive facial appearance, 300486 (3).
BioGrid reports that CG6742 interacts with CG7041 .
TRiP has 1 RNAi stocks for FBgn0039056 available for purchase.
VDRC has 2 RNAi stocks for FBgn0039056 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	179 ± 9	4 of 4	1.30	Up
Head	128 ± 3	4 of 4	0.90	None
Eye	240 ± 9	4 of 4	1.71	Up
Thoracicoabdominal ganglion	214 ± 8	4 of 4	1.50	Up
Salivary gland	234 ± 13	4 of 4	1.66	Up
Crop	150 ± 2	4 of 4	1.10	None
Midgut	113 ± 3	4 of 4	0.80	Down
Tubule	111 ± 4	4 of 4	0.80	Down
Hindgut	134 ± 3	4 of 4	1.00	None
Heart	95 ± 4	4 of 4	0.68	Down
Fat body	63 ± 5	4 of 4	0.45	Down
Ovary	351 ± 7	4 of 4	2.50	Up
Testis	84 ± 5	4 of 4	0.60	Down
Male accessory glands	274 ± 7	4 of 4	2.00	Up
Virgin spermatheca	197 ± 9	4 of 4	1.40	Up
Mated spermatheca	245 ± 13	4 of 4	1.75	Up
Adult carcass	86 ± 5	4 of 4	0.60	Down
Larval CNS	172 ± 11	4 of 4	1.23	Up
Larval Salivary gland	267 ± 16	4 of 4	1.90	Up
Larval midgut	137 ± 6	4 of 4	0.97	None
Larval tubule	82 ± 4	4 of 4	0.60	Down
Larval hindgut	171 ± 2	4 of 4	1.22	Up
Larval fat body	130 ± 6	4 of 4	0.90	None
Larval trachea	206 ± 7	4 of 4	1.47	Up
Larval carcass	152 ± 2	4 of 4	1.09	None
S2 cells (growing)	421 ± 16	4 of 4	3.00	Up
Whole fly	140 ± 7	4 of 4

Looking for CG6742-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720