FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG6838-RA through 18771 annotations produced 1 hits

(CG6838):

Annotation Number : CG6838
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037182
Gbrowse : chr3L:22707412-22710677 (-) // 100.0 //
Probeset : 1640293_s_at
Accessions : protein= NP_001097663; /// NP_001097664; /// NP_649409; /// NP_730735;, nucleotide= NM_001104193; /// NM_001104194; /// NM_141152; /// NM_168955;
Interpro : 0008060 // ARF GTPase activator activity // inferred from sequence or structural similarity /// 0008060 // ARF GTPase ac
FlyMine data for FBgn0037182.
BDGP gene expression has embryonic in situ data for CG6838: 10 pix of staining in 6 body parts.
BioGrid reports that CG6838 interacts with CG8280 .
TRiP has 1 RNAi stocks for FBgn0037182 available for purchase.
VDRC has 1 RNAi stocks for FBgn0037182 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	175 ± 4	4 of 4	0.80	Down
Head	189 ± 3	4 of 4	0.90	None
Eye	217 ± 10	4 of 4	1.02	None
Thoracicoabdominal ganglion	155 ± 4	4 of 4	0.70	Down
Salivary gland	1134 ± 46	4 of 4	5.32	Up
Crop	250 ± 3	4 of 4	1.20	Up
Midgut	298 ± 6	4 of 4	1.40	Up
Tubule	231 ± 17	4 of 4	1.10	None
Hindgut	206 ± 10	4 of 4	1.00	None
Heart	241 ± 8	4 of 4	1.13	None
Fat body	362 ± 21	4 of 4	1.70	Up
Ovary	306 ± 4	4 of 4	1.40	Up
Testis	135 ± 7	4 of 4	0.60	Down
Male accessory glands	1294 ± 66	4 of 4	6.10	Up
Virgin spermatheca	575 ± 19	4 of 4	2.70	Up
Mated spermatheca	630 ± 34	4 of 4	2.96	Up
Adult carcass	209 ± 7	4 of 4	1.00	None
Larval CNS	310 ± 5	4 of 4	1.46	Up
Larval Salivary gland	1905 ± 22	4 of 4	8.94	Up
Larval midgut	299 ± 14	4 of 4	1.40	Up
Larval tubule	260 ± 11	4 of 4	1.20	Up
Larval hindgut	349 ± 19	4 of 4	1.64	Up
Larval fat body	262 ± 32	4 of 4	1.20	None
Larval trachea	449 ± 74	4 of 4	2.11	Up
Larval carcass	394 ± 27	4 of 4	1.85	Up
S2 cells (growing)	338 ± 3	4 of 4	1.59	Up
Whole fly	213 ± 8	4 of 4

Looking for CG6838-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720