FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG6866-RA through 18771 annotations produced 1 hits

loquacious (loqs):

Annotation Number : CG6866
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032515
Gbrowse : chr2L:13382647-13385674 (+) // 100.0 //
Probeset : 1636788_a_at
Accessions : protein= NP_001033903; /// NP_609646; /// NP_723813;, nucleotide= NM_001038814; /// NM_135802; /// NM_165041;
Pathway : 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay
Interpro : 0003723 // RNA binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // inferred fro
FlyMine data for FBgn0032515.
BDGP gene expression has embryonic in situ data for CG6866: 14 pix of staining in 13 body parts.
Homophila reports that CG6866 is a close match (1e-16) to human gene DYT16;PACT;PRKRA;RAX (NP_003681), a gene associated with Dystonia 16, 612067 (3).
BioGrid reports that CG6866 interacts with CG6866 CG8273 CG8165 CG8298 CG9564 .
TRiP has 9 RNAi stocks for FBgn0032515 available for purchase.
VDRC has 2 RNAi stocks for FBgn0032515 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	619 ± 12	4 of 4	2.80	Up
Head	551 ± 14	4 of 4	2.50	Up
Eye	1207 ± 57	4 of 4	5.47	Up
Thoracicoabdominal ganglion	702 ± 13	4 of 4	3.20	Up
Salivary gland	202 ± 5	4 of 4	0.92	None
Crop	410 ± 15	4 of 4	1.90	Up
Midgut	95 ± 5	4 of 4	0.40	Down
Tubule	92 ± 5	4 of 4	0.40	Down
Hindgut	212 ± 2	4 of 4	1.00	None
Heart	260 ± 13	4 of 4	1.18	Up
Fat body	153 ± 15	4 of 4	0.70	Down
Ovary	180 ± 3	4 of 4	0.80	Down
Testis	801 ± 15	4 of 4	3.60	Up
Male accessory glands	146 ± 8	4 of 4	0.70	Down
Virgin spermatheca	81 ± 2	4 of 4	0.37	Down
Mated spermatheca	103 ± 4	4 of 4	0.47	Down
Adult carcass	132 ± 3	4 of 4	0.60	Down
Larval CNS	632 ± 31	4 of 4	2.86	Up
Larval Salivary gland	87 ± 4	4 of 4	0.40	Down
Larval midgut	89 ± 2	4 of 4	0.41	Down
Larval tubule	66 ± 3	4 of 4	0.30	Down
Larval hindgut	135 ± 8	4 of 4	0.61	Down
Larval fat body	125 ± 47	4 of 4	0.60	None
Larval trachea	130 ± 34	4 of 4	0.59	Down
Larval carcass	197 ± 8	4 of 4	0.90	None
S2 cells (growing)	59 ± 4	4 of 4	0.27	Down
Whole fly	220 ± 5	4 of 4

Looking for CG6866-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720