Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG6869-RA through 18771 annotations produced 1 hits



"alpha1 (3-fucosyltransferase"):

Annotation Number : CG6869
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : full length
Gbrowse : chr3L:15140239-15147497 (+) // 100.0 //
Probeset : 1629453_at
Accessions : protein= , nucleotide= NP_648754;
Pathway : 0006486 // protein glycosylation // inferred from direct assay /// 0006486 // protein glycosylation // non-traceable aut
Interpro : 0000138 // Golgi trans cisterna // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inf
FlyMine data for full length.
Homophila reports that CG6869 is a close match (2e-30) to human gene FUT3;LE (NP_001091110), a gene associated with [Blood group, Lewis] (3).


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain218 ± 34 of 4 8.00Up
Head45 ± 34 of 4 1.70None
Eye11 ± 12 of 4 0.43None
Thoracicoabdominal ganglion232 ± 34 of 4 8.60Up
Salivary gland246 ± 174 of 4 9.09Up
Crop6 ± 00 of 4 0.30None
Midgut13 ± 24 of 4 0.50None
Tubule3 ± 10 of 4 0.10Down
Hindgut21 ± 14 of 4 0.80None
Heart266 ± 174 of 4 9.83Up
Fat body20 ± 64 of 4 0.76None
Ovary1 ± 00 of 4 0.00None
Testis2 ± 10 of 4 0.10None
Male accessory glands1736 ± 1024 of 464.00Up
Virgin spermatheca7 ± 10 of 4 0.27None
Mated spermatheca6 ± 00 of 4 0.25None
Adult carcass24 ± 32 of 4 0.90None
Larval CNS135 ± 254 of 4 4.99Up
Larval Salivary gland313 ± 174 of 411.55Up
Larval midgut8 ± 02 of 4 0.30None
Larval tubule3 ± 10 of 4 0.10None
Larval hindgut8 ± 03 of 4 0.31None
Larval fat body1 ± 10 of 4 0.10None
Larval trachea4 ± 41 of 4 0.16None
Larval carcass6 ± 12 of 4 0.24None
S2 cells (growing)1 ± 00 of 4 0.06None
Whole fly27 ± 84 of 4

Looking for CG6869-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime