FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG6875-RA through 18771 annotations produced 1 hits

abnormal spindle (asp):

Annotation Number : CG6875
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0000140
Gbrowse : chr3R:20579624-20586235 (+) // 100.0 //
Probeset : 1627383_at
Accessions : protein= NP_524488;, nucleotide= NM_079764;
Pathway : 0000922 // spindle pole // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation ///
Interpro : 0004672 // protein kinase activity // inferred from direct assay /// 0005516 // calmodulin binding // inferred from elec
FlyMine data for FBgn0000140.
BDGP gene expression has embryonic in situ data for asp: 17 pix of staining in 11 body parts.
Homophila reports that CG6875 is a close match (3e-56) to human gene ASPM;MCPH5 (NP_060606), a gene associated with Microcephaly, primary autosomal recessive, 5, with or without simplified gyral pattern, 608716 (3).
BioGrid reports that CG6875 interacts with CG8472 CG9188 CG15793 CG12559 CG12559 .
TRiP has 2 RNAi stocks for FBgn0000140 available for purchase.
VDRC has 3 RNAi stocks for FBgn0000140 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	9 ± 0	2 of 4	0.10	Down
Head	7 ± 3	0 of 4	0.00	Down
Eye	5 ± 1	0 of 4	0.03	Down
Thoracicoabdominal ganglion	15 ± 3	1 of 4	0.10	Down
Salivary gland	28 ± 6	0 of 4	0.15	Down
Crop	14 ± 2	1 of 4	0.10	Down
Midgut	16 ± 1	1 of 4	0.10	Down
Tubule	13 ± 4	1 of 4	0.10	Down
Hindgut	7 ± 2	0 of 4	0.00	Down
Heart	6 ± 0	0 of 4	0.03	Down
Fat body	17 ± 4	0 of 4	0.09	Down
Ovary	452 ± 8	4 of 4	2.50	Up
Testis	146 ± 3	4 of 4	0.80	None
Male accessory glands	11 ± 3	0 of 4	0.10	Down
Virgin spermatheca	16 ± 2	1 of 4	0.09	Down
Mated spermatheca	10 ± 3	1 of 4	0.06	Down
Adult carcass	26 ± 1	4 of 4	0.10	Down
Larval CNS	230 ± 12	4 of 4	1.25	None
Larval Salivary gland	13 ± 1	0 of 4	0.07	Down
Larval midgut	24 ± 2	4 of 4	0.13	Down
Larval tubule	11 ± 1	0 of 4	0.10	Down
Larval hindgut	25 ± 0	4 of 4	0.14	Down
Larval fat body	45 ± 10	3 of 4	0.20	Down
Larval trachea	71 ± 3	4 of 4	0.39	Down
Larval carcass	45 ± 5	2 of 4	0.25	Down
S2 cells (growing)	164 ± 6	4 of 4	0.89	None
Whole fly	183 ± 16	4 of 4

Looking for CG6875-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720